SMTL ID : 1jfg.1 (1 other biounit)

TRICHODIENE SYNTHASE FROM FUSARIUM SPOROTRICHIOIDES COMPLEXED WITH DIPHOSPHATE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: M.73, Y.93, G.186, M.221, N.225, Y.295, W.298 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.295, A:Y.295 GOL.2: 8 residues within 4Å: Chain A: Y.113, F.114, L.117, L.155 Chain B: Y.113, L.117, I.151, L.155 5 PLIP interactions: 1 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:Y.113, B:Y.113 Water bridges: B:N.132, B:N.132, B:N.132 GOL.7: 7 residues within 4Å: Chain B: R.182, G.186, M.221, N.225, Y.295, Y.305 Ligands: POP.6 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.182, B:R.182, B:Y.305

3 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain B: N.225, S.229, E.233 Ligands: POP.6 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:S.229, B:E.233, H2O.12 MG.4: 5 residues within 4Å: Chain B: D.100, D.239, R.304 Ligands: MG.5, POP.6 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.100, H2O.12, H2O.12, H2O.12 MG.5: 5 residues within 4Å: Chain B: D.100, E.164, N.185 Ligands: MG.4, POP.6 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.100, H2O.12, H2O.12

1 x POP: PYROPHOSPHATE 2-(Non-covalent)

POP.6: 12 residues within 4Å: Chain B: D.100, R.182, N.225, S.229, K.232, E.233, R.304, Y.305 Ligands: MG.3, MG.4, MG.5, GOL.7 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:N.185, B:N.225, B:N.225, B:S.229 Water bridges: B:K.232, B:K.232, B:K.232, B:D.239 Salt bridges: B:R.182, B:K.232, B:R.304

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rynkiewicz, M.J. et al., Structure of trichodiene synthase from Fusarium sporotrichioides provides mechanistic inferences on the terpene cyclization cascade. Proc.Natl.Acad.Sci.USA (2001)

Release Date

2001-11-30

Peptides

TRICHODIENE SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

TRICHODIENE SYNTHASE

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