SMTL ID : 1jfg.2 (1 other biounit)

TRICHODIENE SYNTHASE FROM FUSARIUM SPOROTRICHIOIDES COMPLEXED WITH DIPHOSPHATE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: N.225, S.229, E.233 Ligands: POP.4 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.229, A:E.233, H2O.5 MG.2: 5 residues within 4Å: Chain A: D.100, D.239, R.304 Ligands: MG.3, POP.4 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.100, H2O.5, H2O.5, H2O.5 MG.3: 5 residues within 4Å: Chain A: D.100, E.164, N.185 Ligands: MG.2, POP.4 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.100, H2O.5, H2O.5

1 x POP: PYROPHOSPHATE 2-(Non-covalent)

POP.4: 12 residues within 4Å: Chain A: D.100, R.182, N.225, S.229, K.232, E.233, R.304, Y.305 Ligands: MG.1, MG.2, MG.3, GOL.5 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:N.185, A:N.225, A:N.225, A:S.229, A:Y.305 Water bridges: A:K.232, A:K.232, A:K.232, A:D.239 Salt bridges: A:R.182, A:K.232, A:R.304

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 7 residues within 4Å: Chain A: R.182, G.186, M.221, N.225, Y.295, Y.305 Ligands: POP.4 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.182, A:R.182, A:Y.295, A:Y.305, A:Y.305 GOL.6: 7 residues within 4Å: Chain B: M.73, Y.93, G.186, M.221, N.225, Y.295, W.298 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Y.295 GOL.7: 8 residues within 4Å: Chain A: Y.113, L.117, I.151, L.155 Chain B: Y.113, F.114, L.117, L.155 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:Y.113, B:Y.113 Water bridges: A:N.132, A:N.132, A:N.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rynkiewicz, M.J. et al., Structure of trichodiene synthase from Fusarium sporotrichioides provides mechanistic inferences on the terpene cyclization cascade. Proc.Natl.Acad.Sci.USA (2001)

Release Date

2001-11-30

Peptides

TRICHODIENE SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

TRICHODIENE SYNTHASE

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