SMTL ID : 1jzj.3 (4 other biounits)

Pseudomonas aeruginosa Azurin Os(bpy)2(im)(His83)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

6 x CU: COPPER (II) ION(Non-covalent)

CU.1: 6 residues within 4Å: Chain A: G.45, H.46, C.112, F.114, H.117, M.121 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:G.45, A:H.46, A:C.112, A:H.117 CU.5: 5 residues within 4Å: Chain B: A.1, S.25 Chain D: A.1, S.25 Ligands: CU.13 2 PLIP interactions: 1 interactions with chain D, 1 interactions with chain B Metal complexes: D:S.25, B:S.25 CU.6: 6 residues within 4Å: Chain B: G.45, H.46, C.112, F.114, H.117, M.121 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:G.45, B:H.46, B:C.112, B:H.117 CU.9: 6 residues within 4Å: Chain C: G.45, H.46, C.112, F.114, H.117, M.121 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:G.45, C:H.46, C:C.112, C:H.117 CU.13: 5 residues within 4Å: Chain B: A.1, S.25 Chain D: A.1, S.25 Ligands: CU.5 2 PLIP interactions: 1 interactions with chain D, 1 interactions with chain B Metal complexes: D:S.25, B:S.25 CU.14: 6 residues within 4Å: Chain D: G.45, H.46, C.112, F.114, H.117, M.121 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:G.45, D:H.46, D:C.112, D:H.117

4 x DOS: DELTA-BIS(2,2'-BIPYRIDINE)IMIDAZOLE OSMIUM (II)(Non-covalent)

DOS.2: 7 residues within 4Å: Chain A: K.74, D.76, D.77, V.80, I.81, H.83 Ligands: LOS.3 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:D.77, A:V.80, A:V.80 Water bridges: A:H.83 pi-Stacking: A:H.83 DOS.7: 8 residues within 4Å: Chain B: L.73, K.74, D.76, D.77, V.80, I.81, H.83 Ligands: LOS.8 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:L.73, B:D.77, B:V.80, B:V.80 pi-Stacking: B:H.83 DOS.10: 7 residues within 4Å: Chain C: K.74, D.76, D.77, V.80, I.81, H.83 Ligands: LOS.11 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:D.77, C:V.80, C:V.80 pi-Stacking: C:H.83 DOS.15: 8 residues within 4Å: Chain D: L.73, K.74, D.76, D.77, V.80, I.81, H.83 Ligands: LOS.16 5 PLIP interactions: 5 interactions with chain D Hydrophobic interactions: D:L.73, D:D.77, D:V.80, D:V.80 pi-Stacking: D:H.83

4 x LOS: LAMBDA-BIS(2,2'-BIPYRIDINE)IMIDAZOLE OSMIUM (II)(Non-covalent)

LOS.3: 6 residues within 4Å: Chain A: K.74, D.76, D.77, V.80, H.83 Ligands: DOS.2 1 PLIP interactions: 1 interactions with chain A pi-Stacking: A:H.83 LOS.8: 6 residues within 4Å: Chain B: L.73, K.74, D.76, D.77, H.83 Ligands: DOS.7 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:L.73 pi-Stacking: B:H.83 LOS.11: 6 residues within 4Å: Chain C: K.74, D.76, D.77, V.80, H.83 Ligands: DOS.10 1 PLIP interactions: 1 interactions with chain C pi-Stacking: C:H.83 LOS.16: 6 residues within 4Å: Chain D: L.73, K.74, D.76, D.77, H.83 Ligands: DOS.15 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:L.73 pi-Stacking: D:H.83

2 x IME: TETRA(IMIDAZOLE)DIAQUACOPPER (II)(Non-covalent)

IME.4: 9 residues within 4Å: Chain A: K.24, S.25, C.26, K.27, D.98, V.99, S.100, L.102, L.127 3 PLIP interactions: 3 interactions with chain A, Hydrogen bonds: A:K.24, A:V.99, A:S.100 IME.12: 9 residues within 4Å: Chain C: K.24, S.25, C.26, K.27, D.98, V.99, S.100, L.102, L.127 3 PLIP interactions: 3 interactions with chain C, Hydrogen bonds: C:K.24, C:V.99, C:S.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crane, B.R. et al., Electron tunneling in single crystals of Pseudomonas aeruginosa azurins. J.Am.Chem.Soc. (2001)

Release Date

2001-10-24

Peptides

azurin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

azurin

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