SMTL ID : 1k2f.1 (1 other biounit)

siah, Seven In Absentia Homolog

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.36, C.43, H.55, H.60 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.36, A:C.43, A:H.55, A:H.60 ZN.2: 3 residues within 4Å: Chain A: D.108, H.110 Chain B: H.110 4 PLIP interactions: 1 interactions with chain B, 3 interactions with chain A Metal complexes: B:H.110, A:D.108, A:D.108, A:H.110 ZN.3: 2 residues within 4Å: Chain A: H.138, E.177 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.138, A:E.177, A:E.177 ZN.4: 5 residues within 4Å: Chain A: C.6, C.13, I.15, H.25, C.29 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.6, A:C.13, A:H.25, A:C.29 ZN.8: 4 residues within 4Å: Chain B: C.36, C.43, H.55, H.60 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.36, B:C.43, B:H.55, B:H.60 ZN.9: 4 residues within 4Å: Chain B: C.6, C.13, H.25, C.29 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.6, B:C.13, B:H.25, B:C.29

4 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.5: 4 residues within 4Å: Chain A: C.38, P.39, I.63, V.87 No protein-ligand interaction detected (PLIP) BME.6: 3 residues within 4Å: Chain A: A.130, C.190 Chain B: R.139 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.139 BME.7: 2 residues within 4Å: Chain A: R.139, R.141 No protein-ligand interaction detected (PLIP) BME.10: 5 residues within 4Å: Chain B: C.38, P.39, H.60, I.63, M.98 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Polekhina, G. et al., Siah ubiquitin ligase is structurally related to TRAF and modulates TNF-alpha signaling. Nat.Struct.Biol. (2002)

Release Date

2001-12-28

Peptides

siah-1A protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

siah-1A protein

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