- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 8 x ACT: ACETATE ION(Non-functional Binders)
ACT.2: 3 residues within 4Å:- Chain A: G.124, K.125
- Ligands: ACT.3
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.125
- Water bridges: A:Y.126
- Salt bridges: A:K.125
ACT.3: 2 residues within 4Å:- Chain A: Y.164
- Ligands: ACT.2
3 PLIP interactions:3 interactions with chain A- Water bridges: A:N.165, A:N.165
- Salt bridges: A:K.125
ACT.4: 1 residues within 4Å:- Chain A: Q.90
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.90, A:Q.90
ACT.5: 6 residues within 4Å:- Chain A: E.68, R.109
- Chain B: R.30, R.183
- Ligands: ZN.1, CL.6
7 PLIP interactions:5 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:R.30
- Water bridges: B:R.24, B:R.183, A:R.109
- Salt bridges: B:H.31, B:R.183, A:R.109
ACT.10: 3 residues within 4Å:- Chain B: G.124, K.125
- Ligands: ACT.11
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:K.125
- Salt bridges: B:K.125
ACT.11: 2 residues within 4Å:- Chain B: Y.164
- Ligands: ACT.10
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Y.164
- Water bridges: B:N.165, B:N.165
- Salt bridges: B:K.125
ACT.12: 1 residues within 4Å:- Chain B: Q.90
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Q.90, B:Q.90
ACT.13: 6 residues within 4Å:- Chain A: R.30, R.183
- Chain B: E.68, R.109
- Ligands: ZN.9, CL.14
7 PLIP interactions:5 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:R.30
- Water bridges: A:R.24, A:R.183, B:R.109
- Salt bridges: A:H.31, A:R.183, B:R.109
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.6: 5 residues within 4Å:- Chain A: C.66, E.68
- Chain B: H.31
- Ligands: ZN.1, ACT.5
Ligand excluded by PLIPCL.7: 5 residues within 4Å:- Chain A: R.33
- Chain B: P.35, Y.36, R.109, V.110
Ligand excluded by PLIPCL.14: 5 residues within 4Å:- Chain A: H.31
- Chain B: C.66, E.68
- Ligands: ZN.9, ACT.13
Ligand excluded by PLIPCL.15: 5 residues within 4Å:- Chain A: P.35, Y.36, R.109, V.110
- Chain B: R.33
Ligand excluded by PLIP- 2 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
SF4.8: 11 residues within 4Å:- Chain A: R.153, I.196, C.197, P.202, C.204, C.207, M.209, S.210, C.213, Y.215, Y.216
4 PLIP interactions:4 interactions with chain A,- Metal complexes: A:C.197, A:C.204, A:C.207, A:C.213
SF4.16: 11 residues within 4Å:- Chain B: R.153, I.196, C.197, P.202, C.204, C.207, M.209, S.210, C.213, Y.215, Y.216
4 PLIP interactions:4 interactions with chain B,- Metal complexes: B:C.197, B:C.204, B:C.207, B:C.213
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mol, C.D. et al., Structure and activity of a thermostable thymine-DNA glycosylase: evidence for base twisting to remove mismatched normal DNA bases. J.Mol.Biol. (2002)
- Release Date
- 2002-01-23
- Peptides
- Possible G-T mismatches repair enzyme: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 8 x ACT: ACETATE ION(Non-functional Binders)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mol, C.D. et al., Structure and activity of a thermostable thymine-DNA glycosylase: evidence for base twisting to remove mismatched normal DNA bases. J.Mol.Biol. (2002)
- Release Date
- 2002-01-23
- Peptides
- Possible G-T mismatches repair enzyme: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A