SMTL ID : 1khe.1

PEPCK complex with nonhydrolyzable GTP analog, MAD data

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 3 residues within 4Å: Chain A: T.294, D.313 Ligands: GCP.3 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.294, H2O.4, H2O.4, H2O.4 MN.2: 5 residues within 4Å: Chain A: K.247, H.267, K.293, D.314 Ligands: GCP.3 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.267, A:D.314, H2O.2, H2O.4

1 x GCP: PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER(Non-covalent)

GCP.3: 20 residues within 4Å: Chain A: H.267, P.288, A.290, C.291, G.292, K.293, T.294, N.295, D.314, V.338, R.408, R.439, W.519, F.520, F.528, G.532, F.533, N.536 Ligands: MN.1, MN.2 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:A.290, A:C.291, A:G.292, A:K.293, A:K.293, A:T.294, A:N.295, A:R.408, A:R.408, A:R.439, A:F.533, A:N.536 Water bridges: A:V.338, A:N.406, A:W.519, A:P.531 pi-Stacking: A:F.520, A:F.533, A:F.533

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dunten, P. et al., Crystal structure of human cytosolic phosphoenolpyruvate carboxykinase reveals a new GTP-binding site. J.Mol.Biol. (2002)

Release Date

2002-02-27

Peptides

Phosphoenolpyruvate Carboxykinase, cytosolic (GTP): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphoenolpyruvate Carboxykinase, cytosolic (GTP)

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