SMTL ID : 1kzh.1

Structure of a pyrophosphate-dependent phosphofructokinase from the Lyme disease spirochete Borrelia burgdorferi

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

homo-dimer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: G.82, R.146, R.431 Chain B: T.241, K.243, Y.244 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Salt bridges: A:R.146, A:R.431, B:K.243 Hydrogen bonds: B:Y.244 SO4.2: 9 residues within 4Å: Chain A: S.80, G.81, R.146, G.174, G.175, D.176, D.177, S.178, K.203 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.146, A:G.175, A:D.177, A:D.177, A:D.177, A:S.178 Water bridges: A:N.386 Salt bridges: A:K.203 SO4.3: 4 residues within 4Å: Chain A: K.71, A.72, N.102, N.104 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.72, A:N.102, A:N.102, A:N.104 SO4.4: 6 residues within 4Å: Chain A: T.241, K.243, Y.244 Chain B: G.82, R.146, R.431 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Salt bridges: B:R.146, B:R.431, A:K.243 SO4.5: 9 residues within 4Å: Chain B: S.80, G.81, R.146, G.174, G.175, D.176, D.177, S.178, K.203 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.175, B:S.178 Salt bridges: B:K.203 SO4.6: 4 residues within 4Å: Chain B: K.71, A.72, N.102, N.104 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:A.72, B:N.102, B:N.104 SO4.7: 6 residues within 4Å: Chain A: D.423, H.424, F.425 Chain B: D.423, H.424, F.425 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:F.425, A:D.423, A:F.425 Water bridges: B:H.424, B:H.424 SO4.8: 4 residues within 4Å: Chain B: K.23, D.24, N.27, E.62 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.24, B:D.24, B:N.27 Salt bridges: B:K.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moore, S.A. et al., The structure of a pyrophosphate-dependent phosphofructokinase from the Lyme disease spirochete Borrelia burgdorferi. Structure (2002)

Release Date

2002-05-15

Peptides

phosphofructokinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

phosphofructokinase

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