- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.08 Å
- Oligo State
- monomer
- Ligands
- 13 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 2 x NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose(Post Translational Modification)
NDG.4: 4 residues within 4Å:- Chain A: F.314, L.318, T.320
- Ligands: NAG.5
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:E.309, A:L.318, A:L.318, A:T.320
NDG.11: 4 residues within 4Å:- Chain A: A.341, I.415, T.431
- Ligands: NAG.10
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:I.415
- Hydrogen bonds: A:A.341, A:T.431
- 12 x CA: CALCIUM ION(Non-covalent)
CA.16: 6 residues within 4Å:- Chain A: N.108, N.110, D.140, D.142, N.149, D.201
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:N.110, A:D.140, A:D.142, A:N.149, A:D.201
CA.17: 6 residues within 4Å:- Chain A: E.17, E.75, D.106, Q.107, D.109, D.142
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.75, A:E.75, A:D.106, A:Q.107, A:D.142
CA.18: 5 residues within 4Å:- Chain A: E.17, N.18, D.73, E.75, D.109
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:E.17, A:D.73, A:E.75, A:D.109
CA.19: 7 residues within 4Å:- Chain A: E.125, R.187, E.188, D.219, A.220, D.222, D.254
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.125, A:D.219, A:D.219, A:D.222, A:D.254
CA.20: 4 residues within 4Å:- Chain A: E.125, D.186, E.188, D.222
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:E.125, A:D.186, A:E.188, A:D.222
CA.21: 6 residues within 4Å:- Chain A: N.221, N.223, D.252, D.254, A.260, N.310
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:N.223, A:D.252, A:D.252, A:D.254, A:A.260
CA.22: 6 residues within 4Å:- Chain A: E.238, D.295, F.296, E.297, E.334
- Ligands: CA.26
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.238, A:D.295, A:D.295, A:E.297, A:E.334
CA.23: 6 residues within 4Å:- Chain A: N.333, E.334, D.364, D.366, Q.371, D.420
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.334, A:D.364, A:D.366, A:D.420, A:D.420
CA.24: 5 residues within 4Å:- Chain A: E.349, D.401, E.403, D.441
- Ligands: CA.27
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.349, A:E.349, A:D.401, A:D.441, A:D.441
CA.25: 6 residues within 4Å:- Chain A: N.440, N.442, D.467, D.469, N.473, D.521
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:N.442, A:D.467, A:D.469, A:D.521
CA.26: 7 residues within 4Å:- Chain A: E.238, E.297, D.331, V.332, E.334, D.366
- Ligands: CA.22
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.297, A:D.331, A:V.332, A:E.334, A:D.366
CA.27: 7 residues within 4Å:- Chain A: E.349, E.403, D.438, V.439, D.441, D.469
- Ligands: CA.24
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.349, A:E.403, A:E.403, A:V.439, A:D.441
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Boggon, T.J. et al., C-cadherin ectodomain structure and implications for cell adhesion mechanisms. Science (2002)
- Release Date
- 2002-04-26
- Peptides
- EP-cadherin: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.08 Å
- Oligo State
- monomer
- Ligands
- 13 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 2 x NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose(Post Translational Modification)
- 12 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Boggon, T.J. et al., C-cadherin ectodomain structure and implications for cell adhesion mechanisms. Science (2002)
- Release Date
- 2002-04-26
- Peptides
- EP-cadherin: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A