SMTL ID : 1l6x.2 (1 other biounit)

FC FRAGMENT OF RITUXIMAB BOUND TO A MINIMIZED VERSION OF THE B-DOMAIN FROM PROTEIN A CALLED Z34C

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

hetero-2-2-mer

Ligands

2 x NAG- NAG- BMA- MAN- NAG- GAL- MAN- NAG- GAL- FUL: beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-GAL-FUL.1: 15 residues within 4Å: Chain A: F.5, F.7, P.8, P.9, K.10, E.22, T.24, V.28, D.29, Q.59, N.61, T.63, R.65 Ligands: NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-GAL-FUL.2, NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-GAL-FUL.2 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Q.59, A:Y.60, A:P.8, A:P.9, A:E.22 Hydrogen bonds: A:K.10, A:K.10, A:E.22, A:E.22, A:T.24, A:T.24, A:R.65, A:K.10 NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-GAL-FUL.2: 15 residues within 4Å: Chain C: F.5, F.7, P.8, P.9, K.10, E.22, T.24, V.28, D.29, Q.59, N.61, T.63, R.65 Ligands: NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-GAL-FUL.1, NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-GAL-FUL.1 1 PLIP interactions: 1 interactions with chain C Water bridges: C:Q.59, C:Y.60, C:P.8, C:P.9, C:E.22 Hydrogen bonds: C:K.10, C:K.10, C:E.22, C:E.22, C:T.24, C:R.65, C:K.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Idusogie, E.E. et al., Mapping of the C1q binding site on rituxan, a chimeric antibody with a human IgG1 Fc. J.Immunol. (2000)

Release Date

2002-04-10

Peptides

IMMUNOGLOBULIN GAMMA-1 HEAVY CHAIN CONSTANT REGION: AC
Minimized B-domain of Protein A Z34C: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

IMMUNOGLOBULIN GAMMA-1 HEAVY CHAIN CONSTANT REGION

Minimized B-domain of Protein A Z34C

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