SMTL ID : 1llq.1

Crystal Structure of Malic Enzyme from Ascaris suum Complexed with Nicotinamide Adenine Dinucleotide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 19 residues within 4Å: Chain A: N.275, T.299, F.326, G.327, A.328, G.329, A.330, A.331, D.361, I.362, A.405, S.406, V.408, L.432, S.433, N.434, G.459, G.477, N.479 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:T.299 Hydrogen bonds: A:A.328, A:A.328, A:A.330, A:A.331, A:I.362, A:S.433, A:N.434, A:N.434, A:G.477 Water bridges: A:G.329, A:S.332 NAD.2: 19 residues within 4Å: Chain B: N.275, T.299, F.326, G.327, A.328, G.329, A.330, A.331, D.361, I.362, A.405, S.406, V.408, L.432, S.433, N.434, G.459, G.477, N.479 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:T.299, B:A.331 Hydrogen bonds: B:A.328, B:A.328, B:A.330, B:A.331, B:I.362, B:S.433, B:N.434, B:N.434, B:G.477 NAD.3: 19 residues within 4Å: Chain C: N.275, T.299, F.326, G.327, A.328, G.329, A.330, A.331, D.361, I.362, A.405, S.406, V.408, L.432, S.433, N.434, G.459, G.477, N.479 12 PLIP interactions: 12 interactions with chain C Hydrophobic interactions: C:T.299 Hydrogen bonds: C:A.328, C:A.328, C:A.330, C:A.331, C:I.362, C:S.433, C:N.434, C:N.434, C:G.477 Water bridges: C:G.329, C:S.332 NAD.4: 19 residues within 4Å: Chain D: N.275, T.299, F.326, G.327, A.328, G.329, A.330, A.331, D.361, I.362, A.405, S.406, V.408, L.432, S.433, N.434, G.459, G.477, N.479 11 PLIP interactions: 11 interactions with chain D Hydrophobic interactions: D:T.299, D:A.331 Hydrogen bonds: D:A.328, D:A.328, D:A.330, D:A.331, D:I.362, D:S.433, D:N.434, D:N.434, D:G.477

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Coleman, D.E. et al., Crystal structure of the malic enzyme from Ascaris suum complexed with nicotinamide adenine dinucleotide at 2.3 A resolution. Biochemistry (2002)

Release Date

2002-05-08

Peptides

NAD-dependent malic enzyme: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

NAD-dependent malic enzyme

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