SMTL ID : 1ly9.1 (1 other biounit)

The impact of the physical and chemical environment on the molecular structure of Coprinus cinereus peroxidase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: S.184, D.201, T.203, V.206, D.208 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.201, A:D.201, A:T.203, A:V.206, A:D.208 CA.2: 4 residues within 4Å: Chain A: D.56, G.74, D.76, S.78 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.56, A:G.74, A:D.76, A:S.78, H2O.1

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.3: 23 residues within 4Å: Chain A: R.47, K.48, L.50, R.51, F.54, P.153, G.154, P.155, L.179, L.180, A.182, H.183, L.185, A.186, S.187, Q.188, E.189, G.190, L.191, M.242, S.244, Y.272, M.276 32 PLIP interactions: 31 interactions with chain A, 1 Ligand-Water interactions, Hydrophobic interactions: A:R.47, A:L.50, A:R.51, A:F.54, A:F.54, A:F.54, A:F.54, A:F.54, A:P.155, A:L.179, A:L.180, A:A.182, A:A.186, A:Q.188, A:L.191, A:Y.272 Hydrogen bonds: A:S.187, A:S.187, A:E.189, A:G.190, A:L.191 Water bridges: A:K.48, A:R.51, A:S.187, A:S.187, A:E.189, A:E.189 Salt bridges: A:R.47, A:K.48, A:R.51 Metal complexes: A:H.183, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Houborg, K. et al., Impact of the physical and chemical environment on the molecular structure of Coprinus cinereus peroxidase. Acta Crystallogr.,Sect.D (2003)

Release Date

2002-06-14

Peptides

Peroxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxidase

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