SMTL ID : 1mos.1 (1 other biounit)

ISOMERASE DOMAIN OF GLUCOSAMINE 6-PHOSPHATE SYNTHASE COMPLEXED WITH 2-AMINO-2-DEOXYGLUCITOL 6-PHOSPHATE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: E.18, N.25, N.152, A.153, G.154 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.25 Water bridges: A:N.21 Salt bridges: A:K.163 SO4.2: 7 residues within 4Å: Chain A: H.225, H.226, D.273 Chain B: H.225, H.226, D.273 Ligands: SO4.8 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:D.273, A:D.273 Salt bridges: B:H.225, B:H.226, A:H.225, A:H.226 SO4.3: 4 residues within 4Å: Chain A: G.300, Q.302, D.317, N.318 1 PLIP interactions: 1 interactions with chain A Water bridges: A:R.297 SO4.7: 5 residues within 4Å: Chain B: E.18, N.25, N.152, A.153, G.154 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.25 Water bridges: B:N.21 Salt bridges: B:K.163 SO4.8: 7 residues within 4Å: Chain A: H.225, H.226, D.273 Chain B: H.225, H.226, D.273 Ligands: SO4.2 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:D.273, B:D.273 Salt bridges: B:H.225, B:H.226, A:H.225, A:H.226 SO4.9: 4 residues within 4Å: Chain B: G.300, Q.302, D.317, N.318 1 PLIP interactions: 1 interactions with chain B Water bridges: B:R.297

2 x NA: SODIUM ION(Non-functional Binders)

NA.4: 2 residues within 4Å: Chain A: D.234 Ligands: MES.6 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.234 Water bridges: A:D.234, A:D.234 NA.10: 2 residues within 4Å: Chain B: D.234 Ligands: MES.12 3 PLIP interactions: 3 interactions with chain B Water bridges: B:D.234, B:D.234, B:D.234

2 x AGP: 2-DEOXY-2-AMINO GLUCITOL-6-PHOSPHATE(Non-covalent)

AGP.5: 15 residues within 4Å: Chain A: C.60, G.61, T.62, S.63, S.107, Q.108, S.109, T.112, V.159, A.160, S.161, K.245, E.248, K.363 Chain B: H.264 15 PLIP interactions: 13 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:T.62, A:S.63, A:S.63, A:Q.108, A:S.109, A:T.112, A:V.159, A:S.161, A:K.245, A:K.245, B:H.264, B:H.264 Water bridges: A:S.63, A:Q.108, A:V.159 AGP.11: 15 residues within 4Å: Chain A: H.264 Chain B: C.60, G.61, T.62, S.63, S.107, Q.108, S.109, T.112, V.159, A.160, S.161, K.245, E.248, K.363 18 PLIP interactions: 17 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:T.62, B:T.62, B:S.63, B:S.63, B:Q.108, B:S.109, B:T.112, B:T.112, B:V.159, B:S.161, B:K.245, B:K.245, A:H.264 Water bridges: B:S.63, B:Q.108, B:V.159, B:E.248, B:E.248

2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.6: 5 residues within 4Å: Chain A: A.280, N.282, E.329, A.332 Ligands: NA.4 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.282, A:E.329 Water bridges: A:N.282, A:V.327, A:E.329 MES.12: 5 residues within 4Å: Chain B: A.280, N.282, E.329, A.332 Ligands: NA.10 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:N.282, B:E.329 Water bridges: B:N.282, B:V.327, B:E.329

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Teplyakov, A. et al., The mechanism of sugar phosphate isomerization by glucosamine 6-phosphate synthase. Protein Sci. (1999)

Release Date

1999-07-29

Peptides

GLUCOSAMINE 6-PHOSPHATE SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

GLUCOSAMINE 6-PHOSPHATE SYNTHASE

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