SMTL ID : 1mud.1

CATALYTIC DOMAIN OF MUTY FROM ESCHERICHIA COLI, D138N MUTANT COMPLEXED TO ADENINE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 9 residues within 4Å: Chain A: R.147, I.191, C.192, P.197, C.199, C.202, Q.205, C.208, A.211 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.192, A:C.199, A:C.202, A:C.208

2 x ADE: ADENINE(Non-covalent)

ADE.2: 7 residues within 4Å: Chain A: R.19, W.24, E.37, L.40, N.138, Q.182, M.185 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.37, A:Q.182 Water bridges: A:E.37, A:L.40, A:N.138 ADE.3: 3 residues within 4Å: Chain A: T.193, R.194, S.195 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.195, A:S.195 Water bridges: A:R.194

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 4 residues within 4Å: Chain A: R.58, D.64, N.67, A.68 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.58, A:R.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guan, Y. et al., MutY catalytic core, mutant and bound adenine structures define specificity for DNA repair enzyme superfamily. Nat.Struct.Biol. (1998)

Release Date

1999-09-20

Peptides

Adenine DNA glycosylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Adenine DNA glycosylase

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