SMTL ID : 1mz5.1

Trypanosoma rangeli sialidase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: K.12, N.15 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.15 NAG.2: 3 residues within 4Å: Chain A: E.22, N.24, T.26 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.24 NAG.3: 6 residues within 4Å: Chain A: S.87, N.115, S.128, D.129, W.130, E.131 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:E.131 Hydrogen bonds: A:S.87, A:N.115, A:E.131 NAG.4: 4 residues within 4Å: Chain A: N.429, S.431, V.432, E.434 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.431, A:E.434, A:E.434 NAG.5: 3 residues within 4Å: Chain A: N.614, S.616, E.617 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.616, A:S.616 Water bridges: A:R.611, A:R.611, A:E.617

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Buschiazzo, A. et al., Structural basis of sialyltransferase activity in trypanosomal sialidases. Embo J. (2000)

Release Date

2002-10-16

Peptides

sialidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

sialidase

Related Entries With Identical Sequence