SMTL ID : 1n4p.1 (5 other biounits)

Protein Geranylgeranyltransferase type-I Complexed with Geranylgeranyl Diphosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain B: D.269, C.271, H.321 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.269, B:D.269, B:C.271, B:H.321, H2O.5

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain B: K.284, I.285, F.286, Q.287 Ligand excluded by PLIP

1 x GRG: GERANYLGERANYL DIPHOSPHATE(Non-covalent)

GRG.3: 20 residues within 4Å: Chain A: K.164, Y.200 Chain B: T.49, F.52, F.53, Y.126, T.127, R.173, Y.176, C.177, Q.212, H.219, G.221, S.222, C.225, R.263, K.266, Y.272, W.275, N.345 18 PLIP interactions: 2 interactions with chain A, 16 interactions with chain B Hydrophobic interactions: A:Y.200, B:F.52, B:F.53, B:F.53, B:Y.126, B:T.127, B:R.173, B:R.173, B:Y.176, B:Q.212, B:W.275 Salt bridges: A:K.164, B:H.219, B:R.263, B:R.263, B:K.266, B:K.266 Water bridges: B:G.262

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Taylor, J.S. et al., Structure of mammalian protein geranylgeranyltransferase type-I. EMBO J. (2003)

Release Date

2003-11-18

Peptides

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha: A
Geranylgeranyl transferase type-1 subunit beta: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

Geranylgeranyl transferase type-1 subunit beta

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