SMTL ID : 1naa.2 (1 other biounit)

Cellobiose Dehydrogenase Flavoprotein Fragment in Complex with Cellobionolactam

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 6 residues within 4Å: Chain A: N.379, S.381, D.454, T.456, Q.457, A.465 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.379, A:S.381, A:S.381, A:Q.457 Water bridges: A:Q.457 NAG.2: 4 residues within 4Å: Chain A: P.313, N.385, S.387, Q.388 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:P.313 Water bridges: A:N.385, A:N.385

1 x 6FA: 6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

6FA.3: 39 residues within 4Å: Chain A: V.8, G.9, A.10, G.11, P.12, G.13, E.32, R.33, F.64, F.68, W.76, F.83, G.85, C.86, L.87, G.90, G.91, T.92, V.94, N.95, G.96, A.97, L.98, V.212, M.213, V.214, S.251, A.252, G.253, I.260, N.474, H.475, D.507, A.508, N.518, P.519, Q.520, L.523 Ligands: ABL.4 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:F.68, A:W.76, A:N.474 Hydrogen bonds: A:A.10, A:A.10, A:G.13, A:R.33, A:G.85, A:L.87, A:G.91, A:N.95, A:G.96, A:L.98, A:L.98, A:V.214, A:V.214, A:A.508, A:Q.520 Water bridges: A:G.11, A:R.33, A:A.254, A:G.256, A:R.259, A:N.474, A:W.476, A:G.521

1 x ABL: (2R,3R,4R,5R)-4,5-dihydroxy-2-(hydroxymethyl)-6-oxopiperidin-3-yl beta-D-glucopyranoside(Non-covalent)

ABL.4: 14 residues within 4Å: Chain A: F.64, E.65, F.68, F.83, G.96, L.98, P.349, T.370, R.372, S.473, N.474, H.475, N.518 Ligands: 6FA.3 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:R.372, A:R.372, A:N.474, A:H.475, A:N.518 Water bridges: A:E.65, A:Y.395, A:Y.395, A:N.472, A:N.474

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hallberg, B.M. et al., Mechanism of the reductive half-reaction in cellobiose dehydrogenase. J.BIOL.CHEM. (2003)

Release Date

2003-01-14

Peptides

Cellobiose dehydrogenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Cellobiose dehydrogenase

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