SMTL ID : 1nbb.1 (1 other biounit)

N-BUTYLISOCYANIDE BOUND RHODOBACTER CAPSULATUS CYTOCHROME C

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Covalent)

HEM.1: 19 residues within 4Å: Chain A: R.10, F.14, M.21, F.55, T.68, E.69, A.70, I.74, F.81, K.84, G.85, M.88, L.114, C.118, C.121, H.122, Y.125, R.126 Ligands: NBN.2 22 PLIP interactions: 22 interactions with chain A, Hydrophobic interactions: A:F.14, A:F.14, A:F.14, A:F.14, A:F.14, A:M.21, A:F.55, A:I.74, A:F.81, A:M.88, A:L.114, A:R.126 Hydrogen bonds: A:T.68, A:E.69, A:E.69, A:E.69, A:A.70 Salt bridges: A:R.10, A:R.126 pi-Stacking: A:H.122 pi-Cation interactions: A:R.126 Metal complexes: A:H.122

1 x NBN: N-BUTYL ISOCYANIDE(Non-covalent)

NBN.2: 5 residues within 4Å: Chain A: F.14, V.51, F.55, H.122 Ligands: HEM.1 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.51, A:F.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tahirov, T.H. et al., Concerted movement of side chains in the haem vicinity observed on ligand binding in cytochrome c' from rhodobacter capsulatus. Nat.Struct.Biol. (1996)

Release Date

1996-08-17

Peptides

CYTOCHROME C': A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CYTOCHROME C'

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