SMTL ID : 1nhz.1 (1 other biounit)

Crystal Structure of the Antagonist Form of Glucocorticoid Receptor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x 486: 11-(4-DIMETHYLAMINO-PHENYL)-17-HYDROXY-13-METHYL-17-PROP-1-YNYL-1,2,6,7,8,11,12,13,14,15,16,17-DODEC AHYDRO-CYCLOPENTA[A]PHENANTHREN-3-ONE(Non-covalent)

486.1: 18 residues within 4Å: Chain A: M.63, L.66, N.67, G.70, Q.73, V.74, W.103, M.104, M.107, A.108, L.111, R.114, F.126, Q.145, M.149, L.235, Y.238, F.240 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.66, A:L.66, A:W.103, A:M.107, A:L.111, A:F.126, A:Q.145, A:L.235 Hydrogen bonds: A:Q.73, A:R.114, A:Q.145 Water bridges: A:R.114

3 x HEZ: HEXANE-1,6-DIOL(Non-covalent)

HEZ.2: 8 residues within 4Å: Chain A: P.44, E.45, V.46, L.47, Q.73, W.80, R.114, K.170 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:P.44, A:Q.73 Hydrogen bonds: A:L.47, A:K.170 Water bridges: A:L.47, A:Q.73, A:R.114 HEZ.3: 10 residues within 4Å: Chain A: Q.100, Y.101, S.102, W.103, M.104, S.177, V.232, L.236, I.272, K.274 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.232, A:L.236 Hydrogen bonds: A:W.103, A:M.104, A:S.177 Water bridges: A:S.105 HEZ.4: 5 residues within 4Å: Chain A: H.148, Y.151, E.230, V.231, N.234 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.151, A:E.230, A:V.231 Hydrogen bonds: A:H.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kauppi, B. et al., The Three-dimensional Structures of Antagonistic and Agonistic Forms of the Glucocorticoid Receptor Ligand-binding Domain: RU-486 INDUCES A TRANSCONFORMATION THAT LEADS TO ACTIVE ANTAGONISM. J.Biol.Chem. (2003)

Release Date

2003-05-06

Peptides

GLUCOCORTICOID RECEPTOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GLUCOCORTICOID RECEPTOR

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