SMTL ID : 1njf.2 (3 other biounits)

Nucleotide bound form of an isolated E. coli clamp loader gamma subunit

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.71, E.72, C.80, G.81, C.83, C.86 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.71, A:C.80, A:C.83, A:C.86

1 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)

AGS.2: 19 residues within 4Å: Chain A: A.14, W.17, R.18, P.19, D.24, V.25, V.26, R.54, G.55, V.56, G.57, K.58, T.59, S.60, D.133, T.164, L.221, R.222, L.225 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:A.14, A:V.26, A:G.55, A:V.56, A:V.56, A:G.57, A:K.58, A:T.59, A:T.59, A:T.59, A:S.60 Water bridges: A:Q.193 Salt bridges: A:K.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Podobnik, M. et al., Nucleotide-Induced Conformational Changes in an Isolated Escherichia coli DNA Polymerase III Clamp Loader Subunit. Structure (2003)

Release Date

2003-04-08

Peptides

DNA polymerase III subunit gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

DNA polymerase III subunit gamma

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