SMTL ID : 1nkk.1 (1 other biounit)

COMPLEX STRUCTURE OF HCMV PROTEASE AND A PEPTIDOMIMETIC INHIBITOR

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

2 x ACE- VAL- DMK- DMH- ALA- CFT: Peptidomimetic inhibitor(Non-covalent)

ACE-VAL-DMK-DMH-ALA-CFT.1: 14 residues within 4Å: Chain A: R.31, H.63, L.131, S.132, L.133, S.134, S.135, R.136, R.137, C.161, V.163, G.164, R.165, R.166 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:R.31, A:L.133, A:S.135, A:S.135, A:R.137, A:R.137, A:R.165 Water bridges: A:L.133, A:R.166 Salt bridges: A:R.31, A:R.137 Halogen bonds: A:C.161 ACE-VAL-DMK-DMH-ALA-CFT.2: 14 residues within 4Å: Chain B: R.31, H.63, L.131, S.132, L.133, S.134, S.135, R.136, R.137, C.161, V.163, G.164, R.165, R.166 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:L.131, B:L.133, B:S.135, B:S.135, B:R.137, B:R.165, B:R.165 Water bridges: B:R.166 Salt bridges: B:R.137 Halogen bonds: B:C.161, B:V.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Khayat, R. et al., Structural and Biochemical Studies of Inhibitor Binding to Human Cytomegalovirus Protease. Biochemistry (2003)

Release Date

2003-02-11

Peptides

Capsid protein P40: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Capsid protein P40

Related Entries With Identical Sequence