SMTL ID : 1nks.2 (3 other biounits)

ADENYLATE KINASE FROM SULFOLOBUS ACIDOCALDARIUS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.57 Å

Oligo State

homo-trimer

Ligands

2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.1: 13 residues within 4Å: Chain A: K.14, N.36, Y.37, G.38, M.41, R.54, M.57, R.58, Q.69, T.92, H.93, I.96, G.105 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:N.36, A:R.58, A:Q.69, A:T.92, A:H.93, A:G.105 Water bridges: A:Y.37, A:G.38, A:R.54, A:R.54, A:R.58, A:R.141 Salt bridges: A:K.14, A:R.54, A:H.93 AMP.2: 14 residues within 4Å: Chain C: K.14, N.36, Y.37, G.38, M.41, R.54, M.57, R.58, Q.69, T.92, H.93, I.96, G.105, R.139 12 PLIP interactions: 12 interactions with chain C Hydrogen bonds: C:N.36, C:R.58, C:Q.69, C:T.92, C:G.105 Water bridges: C:G.38, C:G.38, C:R.58 Salt bridges: C:K.14, C:R.54, C:H.93, C:R.139

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.3: 15 residues within 4Å: Chain C: G.11, V.12, G.13, K.14, S.15, T.16, R.132, R.135, D.136, N.177, V.178, E.179, G.180, D.181, P.182 15 PLIP interactions: 15 interactions with chain C Hydrogen bonds: C:G.11, C:V.12, C:G.13, C:K.14, C:S.15, C:S.15, C:T.16, C:R.135, C:R.135, C:N.177, C:N.177, C:G.180, C:D.181 pi-Cation interactions: C:R.132, C:R.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vonrhein, C. et al., The structure of a trimeric archaeal adenylate kinase. J.Mol.Biol. (1998)

Release Date

1998-12-09

Peptides

ADENYLATE KINASE: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

ADENYLATE KINASE

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