SMTL ID : 1oae.2 (1 other biounit)

Crystal structure of the reduced form of cytochrome c" from Methylophilus methylotrophus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x HEC: HEME C(Covalent)

HEC.1: 17 residues within 4Å: Chain A: F.34, A.48, C.49, C.52, H.53, N.63, I.70, P.71, L.73, R.81, E.91, F.92, H.95, I.99, F.112 Ligands: GOL.2, SO4.5 14 PLIP interactions: 14 interactions with chain A, Hydrophobic interactions: A:F.34, A:I.70, A:L.73, A:L.73, A:F.92, A:I.99, A:I.99 Water bridges: A:R.81, A:R.81, A:R.81, A:E.91 Salt bridges: A:R.81, A:H.95 Metal complexes: A:H.53

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: A.47, I.64, V.65, I.99 Ligands: HEC.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.99 GOL.3: 3 residues within 4Å: Chain A: N.97, D.98, G.101 2 PLIP interactions: 2 interactions with chain A Water bridges: A:D.98, A:G.101

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 2 residues within 4Å: Chain A: K.7, I.85 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.7 SO4.5: 7 residues within 4Å: Chain A: R.81, F.82, T.83, K.87, V.88, E.91 Ligands: HEC.1 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:K.80, A:F.82, A:T.83, A:E.91 Water bridges: A:R.81, A:R.81, A:K.87, A:K.87 Salt bridges: A:R.81, A:K.87 SO4.6: 3 residues within 4Å: Chain A: S.27, I.28, T.29 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.27, A:I.28, A:T.29, A:T.29

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Enguita, F.J. et al., Structural Evidence for a Proton Transfer Pathway Coupled with Haem Reduction of Cytochrome C" from Methylophilus Methylotrophus. J.Biol.Inorg.Chem. (2006)

Release Date

2004-03-26

Peptides

CYTOCHROME C": A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

CYTOCHROME C"

Related Entries With Identical Sequence