SMTL ID : 1ofb.1

CRYSTAL STRUCTURE OF THE TYROSINE-REGULATED 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH MANGANESE(II)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

homo-dimer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: C.76, K.112, H.282, E.316, D.342 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.76, A:H.282, A:E.316, A:D.342 MN.3: 5 residues within 4Å: Chain B: C.76, K.112, H.282, E.316, D.342 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.76, B:H.282, B:E.316, B:D.342

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: E.111, K.120, L.160, D.161 Chain B: Q.185, L.186, E.189, F.224 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:D.161, B:E.189 Water bridges: A:K.120, A:D.161 GOL.4: 8 residues within 4Å: Chain A: Q.185, L.186, E.189, F.224 Chain B: E.111, N.124, L.160, D.161 6 PLIP interactions: 2 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:E.189, B:K.120, B:D.161 Water bridges: A:M.225, B:N.124, B:N.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Koenig, V. et al., Substrate and Metal Complexes of 3-Deoxy-D-Arabino-Heptulosonate-7-Phosphate Synthase from Saccharomyces Cerevisiae Provide New Insights Into the Catalytic Mechanism. J.Mol.Biol. (2004)

Release Date

2004-04-08

Peptides

PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE

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