SMTL ID : 1ok4.2 (1 other biounit)

Archaeal fructose 1,6-bisphosphate aldolase covalently bound to the substrate dihydroxyacetone phosphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-pentamer

Ligands

5 x 13P: 1,3-DIHYDROXYACETONEPHOSPHATE(Covalent)

13P.1: 13 residues within 4Å: Chain A: A.22, D.24, H.25, W.144, Y.146, K.177, S.202, G.203, G.204, A.229, V.230, G.231, R.232 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:A.22, A:K.177 Hydrogen bonds: A:D.24, A:G.203, A:G.204, A:G.204, A:G.204, A:G.231, A:R.232 Water bridges: A:Y.146, A:N.233 Salt bridges: A:H.25, A:K.177, A:R.232 13P.2: 13 residues within 4Å: Chain B: A.22, D.24, H.25, W.144, Y.146, K.177, S.202, G.203, G.204, A.229, V.230, G.231, R.232 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:A.22, B:K.177 Hydrogen bonds: B:D.24, B:G.203, B:G.204, B:G.204, B:G.204, B:G.231, B:R.232 Water bridges: B:N.233 Salt bridges: B:H.25, B:K.177, B:R.232 13P.3: 13 residues within 4Å: Chain C: A.22, D.24, H.25, W.144, Y.146, K.177, S.202, G.203, G.204, A.229, V.230, G.231, R.232 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:A.22, C:K.177 Hydrogen bonds: C:G.203, C:G.204, C:G.204, C:G.204, C:G.231, C:R.232 Water bridges: C:D.24, C:D.24, C:N.233 Salt bridges: C:H.25, C:K.177, C:R.232 13P.4: 13 residues within 4Å: Chain D: A.22, D.24, H.25, W.144, Y.146, K.177, S.202, G.203, G.204, A.229, V.230, G.231, R.232 14 PLIP interactions: 14 interactions with chain D Hydrophobic interactions: D:A.22, D:K.177 Hydrogen bonds: D:D.24, D:G.203, D:G.204, D:G.204, D:G.204, D:G.231, D:R.232 Water bridges: D:S.202, D:N.233 Salt bridges: D:H.25, D:K.177, D:R.232 13P.5: 13 residues within 4Å: Chain E: A.22, D.24, H.25, W.144, Y.146, K.177, S.202, G.203, G.204, A.229, V.230, G.231, R.232 13 PLIP interactions: 13 interactions with chain E Hydrophobic interactions: E:K.177 Hydrogen bonds: E:D.24, E:G.203, E:G.204, E:G.204, E:G.204, E:G.231, E:R.232 Water bridges: E:K.177, E:N.233 Salt bridges: E:H.25, E:K.177, E:R.232

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lorentzen, E. et al., Crystal structure of an archaeal class I aldolase and the evolution of (betaalpha)8 barrel proteins. J. Biol. Chem. (2003)

Release Date

2003-09-04

Peptides

FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I: ABCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
G

C
H

D
I

E
J

FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I

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