SMTL ID : 1oop.4 (3 other biounits)

The Crystal Structure of Swine Vesicular Disease Virus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x SPH: SPHINGOSINE(Non-covalent)

SPH.1: 13 residues within 4Å: Chain A: I.94, T.96, L.116, L.118, Y.145, P.167, V.169, M.180, V.182, Y.191, S.192, I.209, M.215 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:T.96, A:L.118, A:Y.145, A:Y.145, A:Y.145, A:V.169, A:V.182 Hydrogen bonds: A:T.96, A:S.192, A:S.192

1 x MYR: MYRISTIC ACID(Non-covalent)

MYR.2: 3 residues within 4Å: Chain D: G.2, I.30, Y.32 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:Y.32 Hydrogen bonds: D:G.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fry, E.E. et al., Crystal Structure of Swine Vesicular Disease Virus and Implications for Host Adaptation. J.Virol. (2003)

Release Date

2003-04-22

Peptides

Coat protein VP1: A
Coat protein VP2: B
Coat protein VP3: C
Coat protein VP4: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Coat protein VP1

Coat protein VP2

Coat protein VP3

Coat protein VP4

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