SMTL ID : 1or8.1 (1 other biounit)

Structure of the Predominant protein arginine methyltransferase PRMT1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

hetero-1-4-mer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 22 residues within 4Å: Chain A: H.32, L.36, R.41, G.65, S.66, G.67, I.70, L.71, I.86, E.87, C.88, S.89, G.113, K.114, V.115, E.116, E.131, M.142, T.145 Chain B: R.9 Chain C: R.15 Chain D: R.9 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:H.32, A:G.65, A:G.67, A:C.88, A:V.115, A:E.116 Water bridges: A:G.69 Salt bridges: A:R.41

1 x UNL: UNKNOWN LIGAND

UNL.2: 8 residues within 4Å: Chain A: D.174, Y.177, D.207, V.208, V.209, D.210, Q.213, Y.287 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.177, A:Y.177, A:V.209 Hydrogen bonds: A:D.210, A:Q.213

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: W.184, N.187, V.188, Y.189 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.184, A:Y.189 GOL.4: 4 residues within 4Å: Chain A: E.298, E.299, F.301, K.325 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.299 Water bridges: A:K.325, A:K.325

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, X. et al., Structure of the Predominant Protein Arginine Methyltransferase PRMT1 and Analysis of Its Binding to Substrate Peptides. Structure (2003)

Release Date

2003-08-26

Peptides

Protein arginine N-methyltransferase 1: A
Substrate peptide: BCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Protein arginine N-methyltransferase 1

Substrate peptide

Related Entries With Identical Sequence