SMTL ID : 1p0k.3 (2 other biounits)

IPP:DMAPP isomerase type II apo structure

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-tetramer

Ligands

4 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: G.258, G.259, M.279, A.280, G.281 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.259, A:A.280, A:G.281 Water bridges: A:G.258, A:G.258, A:G.258, A:G.258, A:H.282 PO4.2: 5 residues within 4Å: Chain B: G.258, G.259, M.279, A.280, G.281 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:G.259, B:A.280, B:G.281 Water bridges: B:G.258, B:G.258, B:G.258, B:G.258, B:H.282 PO4.3: 5 residues within 4Å: Chain C: G.258, G.259, M.279, A.280, G.281 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:G.259, C:A.280, C:G.281 Water bridges: C:G.258, C:G.258, C:G.258, C:G.258, C:H.282 PO4.4: 5 residues within 4Å: Chain D: G.258, G.259, M.279, A.280, G.281 8 PLIP interactions: 8 interactions with chain D Hydrogen bonds: D:G.259, D:A.280, D:G.281 Water bridges: D:G.258, D:G.258, D:G.258, D:G.258, D:H.282

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Steinbacher, S. et al., Crystal Structure of the Type II Isopentenyl Diphosphate:Dimethylallyl Diphosphate Isomerase from Bacillus subtilis. J.Mol.Biol. (2003)

Release Date

2003-06-17

Peptides

Isopentenyl-diphosphate delta-isomerase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

D
B

Isopentenyl-diphosphate delta-isomerase

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