SMTL ID : 1p0n.2 (2 other biounits)

IPP:DMAPP isomerase type II, FMN complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-tetramer

Ligands

4 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 12 residues within 4Å: Chain A: N.61, M.63, T.64, G.92, S.93, N.122, H.147, K.184, G.258, G.259, A.280, G.281 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:M.63 Hydrogen bonds: A:N.61, A:T.64, A:T.64, A:S.93, A:N.122, A:N.122, A:H.147, A:K.184, A:K.184, A:K.184, A:G.258, A:G.259, A:A.280, A:G.281, A:H.282 FMN.2: 12 residues within 4Å: Chain B: N.61, M.63, T.64, G.92, S.93, N.122, H.147, K.184, G.258, G.259, A.280, G.281 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:M.63 Hydrogen bonds: B:N.61, B:T.64, B:T.64, B:S.93, B:N.122, B:N.122, B:H.147, B:K.184, B:K.184, B:K.184, B:G.258, B:G.259, B:A.280, B:G.281, B:H.282 FMN.3: 12 residues within 4Å: Chain C: N.61, M.63, T.64, G.92, S.93, N.122, H.147, K.184, G.258, G.259, A.280, G.281 16 PLIP interactions: 16 interactions with chain C Hydrophobic interactions: C:M.63 Hydrogen bonds: C:N.61, C:T.64, C:T.64, C:S.93, C:N.122, C:N.122, C:H.147, C:K.184, C:K.184, C:K.184, C:G.258, C:G.259, C:A.280, C:G.281, C:H.282 FMN.4: 12 residues within 4Å: Chain D: N.61, M.63, T.64, G.92, S.93, N.122, H.147, K.184, G.258, G.259, A.280, G.281 16 PLIP interactions: 16 interactions with chain D Hydrophobic interactions: D:M.63 Hydrogen bonds: D:N.61, D:T.64, D:T.64, D:S.93, D:N.122, D:N.122, D:H.147, D:K.184, D:K.184, D:K.184, D:G.258, D:G.259, D:A.280, D:G.281, D:H.282

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Steinbacher, S. et al., Crystal Structure of the Type II Isopentenyl Diphosphate:Dimethylallyl Diphosphate Isomerase from Bacillus subtilis. J.Mol.Biol. (2003)

Release Date

2003-06-17

Peptides

Isopentenyl-diphosphate delta-isomerase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Isopentenyl-diphosphate delta-isomerase

Related Entries With Identical Sequence