SMTL ID : 1p4t.1 (1 other biounit)

Crystal structure of Neisserial surface protein A (NspA)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: H.14, K.25 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:H.14, A:K.25

5 x CXE: PENTAETHYLENE GLYCOL MONODECYL ETHER(Non-covalent)

CXE.2: 10 residues within 4Å: Chain A: A.10, D.11, P.29, R.30, I.31, Y.46, R.48, A.149, V.151 Ligands: CXE.3 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.151 CXE.3: 10 residues within 4Å: Chain A: A.12, A.13, H.14, F.27, Y.52, A.126, L.147, S.148, A.149 Ligands: CXE.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.52 CXE.4: 3 residues within 4Å: Chain A: L.108, Y.130, Y.132 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.108 Hydrogen bonds: A:Y.130 CXE.5: 6 residues within 4Å: Chain A: Y.35, I.37, F.42, A.66, S.67, A.68 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.42, A:A.66, A:A.68 CXE.6: 14 residues within 4Å: Chain A: A.17, S.18, S.19, G.22, S.23, F.59, L.61, A.91, S.100, F.101, S.102, V.136, N.137, V.142 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.59 Hydrogen bonds: A:N.137

1 x ETA: ETHANOLAMINE(Non-covalent)

ETA.7: 6 residues within 4Å: Chain A: R.30, R.41, I.69, Y.81, D.125, R.152 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.30, A:R.41, A:R.41, A:R.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vandeputte-Rutten, L. et al., Crystal structure of Neisserial Surface Protein A (NspA), a conserved outer membrane protein with vaccine potential. J.Biol.Chem. (2003)

Release Date

2003-07-22

Peptides

outer membrane protein NspA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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outer membrane protein NspA

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