SMTL ID : 1p7m.1

SOLUTION STRUCTURE AND BASE PERTURBATION STUDIES REVEAL A NOVEL MODE OF ALKYLATED BASE RECOGNITION BY 3-METHYLADENINE DNA GLYCOSYLASE I

Coordinates

PDB Format

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.4, H.17, H.175, C.179 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.4, A:H.17, A:H.175, A:C.179

1 x ADK: 3-METHYL-3H-PURIN-6-YLAMINE(Non-covalent)

ADK.2: 9 residues within 4Å: Chain A: W.6, Y.13, Y.16, W.21, E.38, Q.41, W.46, S.164, A.168 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.16, A:E.38, A:E.38, A:E.38 pi-Stacking: A:W.46, A:W.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cao, C. et al., Solution structure and base perturbation studies reveal a novel mode of alkylated base recognition by 3-methyladenine DNA glycosylase I. J.Biol.Chem. (2003)

Release Date

2003-11-25

Peptides

DNA-3-methyladenine glycosylase I: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA-3-methyladenine glycosylase I

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