SMTL ID : 1pdh.1

CRYSTAL STRUCTURE OF P-HYDROXYBENZOATE HYDROXYLASE RECONSTITUTED WITH THE MODIFIED FAD PRESENT IN ALCOHOL OXIDASE FROM METHYLOTROPHIC YEASTS: EVIDENCE FOR AN ARABINOFLAVIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x FAS: ARABINO-FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAS.1: 27 residues within 4Å: Chain A: I.8, G.9, G.11, P.12, S.13, L.31, E.32, R.33, Q.34, R.42, R.44, A.45, Q.102, V.127, C.158, D.159, G.160, G.163, I.164, Y.222, G.285, D.286, P.293, A.296, G.298, L.299 Ligands: PHB.2 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:R.44 Hydrogen bonds: A:A.10, A:S.13, A:S.13, A:S.13, A:R.33, A:R.42, A:R.42, A:R.44, A:Q.102, A:Q.102, A:I.164, A:D.286, A:L.299 Water bridges: A:G.11, A:G.14, A:R.33, A:R.42, A:R.44, A:R.44, A:G.46, A:V.47, A:V.127, A:V.127, A:G.160, A:D.286, A:A.287, A:A.302 Salt bridges: A:R.44 FAS.3: 27 residues within 4Å: Chain B: I.8, G.9, G.11, P.12, S.13, L.31, E.32, R.33, Q.34, R.42, R.44, A.45, Q.102, V.127, C.158, D.159, G.160, G.163, I.164, Y.222, G.285, D.286, P.293, A.296, G.298, L.299 Ligands: PHB.4 31 PLIP interactions: 31 interactions with chain B Hydrophobic interactions: B:R.44 Hydrogen bonds: B:A.10, B:S.13, B:S.13, B:S.13, B:R.33, B:R.42, B:R.42, B:R.44, B:Q.102, B:Q.102, B:I.164, B:Y.222, B:D.286, B:L.299 Water bridges: B:G.11, B:G.14, B:R.33, B:R.42, B:R.44, B:R.44, B:G.46, B:V.47, B:V.127, B:V.127, B:G.160, B:D.286, B:D.286, B:A.287, B:A.302 Salt bridges: B:R.44

2 x PHB: P-HYDROXYBENZOIC ACID(Non-covalent)

PHB.2: 15 residues within 4Å: Chain A: R.44, G.46, V.47, W.185, L.199, Y.201, L.210, S.212, R.214, R.220, Y.222, P.293, T.294, A.296 Ligands: FAS.1 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.47, A:W.185, A:L.199, A:Y.222 Hydrogen bonds: A:S.212, A:S.212, A:Y.222, A:P.293, A:A.296 Water bridges: A:G.46 Salt bridges: A:R.214 PHB.4: 15 residues within 4Å: Chain B: R.44, G.46, V.47, W.185, L.199, Y.201, L.210, S.212, R.214, R.220, Y.222, P.293, T.294, A.296 Ligands: FAS.3 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:V.47, B:W.185, B:L.199, B:Y.222 Hydrogen bonds: B:Y.201, B:S.212, B:S.212, B:P.293, B:A.296 Water bridges: B:G.46 Salt bridges: B:R.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

van Berkel, W.J. et al., Crystal structure of p-hydroxybenzoate hydroxylase reconstituted with the modified FAD present in alcohol oxidase from methylotrophic yeasts: evidence for an arabinoflavin. Protein Sci. (1994)

Release Date

1995-03-31

Peptides

P-HYDROXYBENZOATE HYDROXYLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

P-HYDROXYBENZOATE HYDROXYLASE

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