SMTL ID : 1pl3.1 (1 other biounit)

Cytochrome Domain Of Cellobiose Dehydrogenase, M65H mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 7 residues within 4Å: Chain A: P.9, V.49, N.111, S.112, T.113, H.114, K.116 No protein-ligand interaction detected (PLIP)

4 x CD: CADMIUM ION(Non-covalent)

CD.2: 2 residues within 4Å: Chain A: P.21, D.24 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.21, A:D.24, A:D.24, H2O.2 CD.3: 3 residues within 4Å: Chain A: E.107, Y.184, N.186 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.107, H2O.5, H2O.7 CD.4: 1 residues within 4Å: Chain A: E.126 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.126, A:E.126 CD.5: 1 residues within 4Å: Chain A: D.165 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.165, A:D.165, H2O.2

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.6: 19 residues within 4Å: Chain A: W.56, G.58, I.59, A.64, H.65, L.70, L.71, V.72, Y.90, Q.92, P.93, A.142, A.144, F.160, S.161, E.162, H.163, F.166, F.168 19 PLIP interactions: 19 interactions with chain A, Hydrophobic interactions: A:W.56, A:L.70, A:L.70, A:V.72, A:Y.90, A:Q.92, A:P.93, A:A.142, A:A.144, A:E.162, A:E.162, A:F.166, A:F.166, A:F.168 Hydrogen bonds: A:H.65 Water bridges: A:N.66 pi-Stacking: A:F.166 Metal complexes: A:H.65, A:H.163

1 x 1PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL(Non-covalent)

1PG.7: 3 residues within 4Å: Chain A: Q.1, S.2, F.168 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.1 Water bridges: A:G.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rotsaert, F.A.J. et al., Biophysical and Structural Analysis of a Novel Heme b Iron Ligation in the Flavocytochrome Cellobiose Dehydrogenase. J.Biol.Chem. (2003)

Release Date

2003-07-01

Peptides

Cellobiose dehydrogenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cellobiose dehydrogenase

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