SMTL ID : 1pu8.1 (1 other biounit)

Crystal structure of H.pylori 3-methyladenine DNA glycosylase (MagIII) bound to 1,N6-ethenoadenine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

monomer

Ligands

1 x EA1: 3H-IMIDAZO[2,1-I]PURINE(Non-covalent)

EA1.1: 7 residues within 4Å: Chain A: W.24, W.25, P.26, T.40, F.45, E.208, K.211 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.211 pi-Stacking: A:W.24, A:W.24, A:W.25, A:W.25, A:W.25, A:F.45

1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.2: 3 residues within 4Å: Chain A: N.54, A.58, C.83 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eichman, B.F. et al., Crystal structures of 3-methyladenine DNA glycosylase MagIII and the recognition of alkylated bases. Embo J. (2003)

Release Date

2003-10-07

Peptides

3-METHYLADENINE DNA GLYCOSYLASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3-METHYLADENINE DNA GLYCOSYLASE

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