SMTL ID : 1qhs.1

CHLORAMPHENICOL PHOSPHOTRANSFERASE IN COMPLEX WITH CHLORAMPHENICOL FROM STREPTOMYCES VENEZUELAE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-tetramer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: A.50, E.51 Ligands: CLM.4 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.51 SO4.2: 8 residues within 4Å: Chain A: G.11, S.12, S.13, A.14, G.15, K.16, S.17, R.133 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:S.13, A:A.14, A:G.15, A:K.16, A:S.17 Water bridges: A:G.15, A:S.17, A:S.17, A:R.133 Salt bridges: A:K.16, A:R.133 SO4.5: 3 residues within 4Å: Chain B: A.50, E.51 Ligands: CLM.8 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.51 SO4.6: 8 residues within 4Å: Chain B: G.11, S.12, S.13, A.14, G.15, K.16, S.17, R.133 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:S.13, B:A.14, B:G.15, B:K.16, B:S.17 Water bridges: B:G.15, B:S.17, B:S.17, B:R.133 Salt bridges: B:K.16, B:R.133 SO4.9: 3 residues within 4Å: Chain C: A.50, E.51 Ligands: CLM.12 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:E.51 SO4.10: 8 residues within 4Å: Chain C: G.11, S.12, S.13, A.14, G.15, K.16, S.17, R.133 11 PLIP interactions: 11 interactions with chain C Hydrogen bonds: C:S.13, C:A.14, C:G.15, C:K.16, C:S.17 Water bridges: C:G.15, C:S.17, C:S.17, C:R.133 Salt bridges: C:K.16, C:R.133 SO4.13: 3 residues within 4Å: Chain D: A.50, E.51 Ligands: CLM.16 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:E.51 SO4.14: 8 residues within 4Å: Chain D: G.11, S.12, S.13, A.14, G.15, K.16, S.17, R.133 11 PLIP interactions: 11 interactions with chain D Hydrogen bonds: D:S.13, D:A.14, D:G.15, D:K.16, D:S.17 Water bridges: D:G.15, D:S.17, D:S.17, D:R.133 Salt bridges: D:K.16, D:R.133

8 x CLM: CHLORAMPHENICOL(Non-covalent)

CLM.3: 13 residues within 4Å: Chain A: S.12, V.36, D.37, I.40, I.54, F.56, I.64, F.68, V.94, L.96, R.136, M.140, Q.144 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:V.36, A:I.40, A:I.54, A:F.56, A:V.94, A:L.96 Hydrogen bonds: A:S.12, A:S.12, A:D.37, A:R.136, A:Q.144 Water bridges: A:K.16, A:D.37, A:V.137 CLM.4: 8 residues within 4Å: Chain A: P.44, K.46, M.47, A.50, E.67 Chain C: P.28, P.30 Ligands: SO4.1 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:A.50, C:P.30 Halogen bonds: A:K.46 CLM.7: 13 residues within 4Å: Chain B: S.12, V.36, D.37, I.40, I.54, F.56, I.64, F.68, V.94, L.96, R.136, M.140, Q.144 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:V.36, B:I.40, B:I.54, B:F.56, B:V.94, B:L.96 Hydrogen bonds: B:S.12, B:S.12, B:D.37, B:R.136, B:Q.144 Water bridges: B:K.16, B:D.37, B:V.137 CLM.8: 8 residues within 4Å: Chain B: P.44, K.46, M.47, A.50, E.67 Chain D: P.28, P.30 Ligands: SO4.5 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain D Hydrophobic interactions: B:A.50, D:P.30 Halogen bonds: B:K.46 CLM.11: 13 residues within 4Å: Chain C: S.12, V.36, D.37, I.40, I.54, F.56, I.64, F.68, V.94, L.96, R.136, M.140, Q.144 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:V.36, C:I.40, C:I.54, C:F.56, C:V.94, C:L.96 Hydrogen bonds: C:S.12, C:S.12, C:D.37, C:R.136, C:Q.144 Water bridges: C:K.16, C:D.37, C:V.137 CLM.12: 8 residues within 4Å: Chain A: P.28, P.30 Chain C: P.44, K.46, M.47, A.50, E.67 Ligands: SO4.9 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain A Hydrophobic interactions: C:A.50, A:P.30 Halogen bonds: C:K.46 CLM.15: 13 residues within 4Å: Chain D: S.12, V.36, D.37, I.40, I.54, F.56, I.64, F.68, V.94, L.96, R.136, M.140, Q.144 14 PLIP interactions: 14 interactions with chain D Hydrophobic interactions: D:V.36, D:I.40, D:I.54, D:F.56, D:V.94, D:L.96 Hydrogen bonds: D:S.12, D:S.12, D:D.37, D:R.136, D:Q.144 Water bridges: D:K.16, D:D.37, D:V.137 CLM.16: 8 residues within 4Å: Chain B: P.28, P.30 Chain D: P.44, K.46, M.47, A.50, E.67 Ligands: SO4.13 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain D Hydrophobic interactions: B:P.30, D:A.50 Halogen bonds: D:K.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Izard, T. et al., The Crystal Structures of Chloramphenicol Phosphotransferase Reveal a Novel Inactivation Mechanism. Embo J. (2000)

Release Date

2000-06-01

Peptides

PROTEIN (CHLORAMPHENICOL PHOSPHOTRANSFERASE): ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

PROTEIN (CHLORAMPHENICOL PHOSPHOTRANSFERASE)

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