SMTL ID : 1qz4.1

Structure of YcfC Protein of Unknown Function Escherichia coli

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: R.97, H.182, G.187, R.188 Ligands: HG.8 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.188 Salt bridges: A:R.97, A:H.182

10 x HG: MERCURY (II) ION(Non-covalent)

HG.2: 3 residues within 4Å: Chain A: L.12, C.16, T.89 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.16, H2O.3 HG.3: 1 residues within 4Å: Chain A: H.208 No protein-ligand interaction detected (PLIP) HG.4: 3 residues within 4Å: Chain A: C.31, L.36 Ligands: HG.9 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:C.31, H2O.2, H2O.3 HG.5: 1 residues within 4Å: Chain A: H.27 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.27, H2O.4, H2O.4 HG.6: 2 residues within 4Å: Chain A: E.121 Ligands: HG.7 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.121, H2O.3 HG.7: 3 residues within 4Å: Chain A: E.121, H.122 Ligands: HG.6 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.121, A:H.122, H2O.3 HG.8: 3 residues within 4Å: Chain A: H.182, G.186 Ligands: PO4.1 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.182, A:G.186, H2O.1, H2O.1 HG.9: 4 residues within 4Å: Chain A: L.21, L.25, C.31 Ligands: HG.4 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.31 HG.10: 3 residues within 4Å: Chain A: R.118, Q.119, H.122 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:R.118, A:H.122 HG.11: 4 residues within 4Å: Chain A: L.109, I.113, L.172, R.176 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Otwinowski, Z. et al., Structure of a hypothetical protein ycfC coded by Escherichia coli genome. To be Published

Release Date

2004-03-30

Peptides

Hypothetical protein ycfC: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hypothetical protein ycfC

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