SMTL ID : 1r0q.1

Characterization of the conversion of the malformed, recombinant cytochrome rc552 to a 2-formyl-4-vinyl (Spirographis) heme

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

monomer

Ligands

1 x HFM: 2-FORMYL-PROTOPORPHRYN IX(Non-covalent)

HFM.1: 26 residues within 4Å: Chain A: Y.8, C.11, C.14, H.15, A.25, F.26, P.27, L.29, H.32, Y.45, L.46, V.49, L.54, Q.55, G.56, I.58, V.60, Y.65, N.66, G.67, V.68, M.69, F.72, V.83, I.87, R.125 15 PLIP interactions: 15 interactions with chain A, Hydrophobic interactions: A:F.26, A:P.27, A:L.29, A:L.46, A:V.49, A:L.54, A:I.58, A:F.72, A:F.72, A:I.87 Hydrogen bonds: A:Y.45, A:G.67 Salt bridges: A:H.32, A:R.125 Metal complexes: A:H.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fee, J.A. et al., Cytochrome rC552, formed during expression of the truncated, Thermus thermophilus cytochrome c552 gene in the cytoplasm of Escherichia coli, reacts spontaneously to form protein-bound 2-formyl-4-vinyl (Spirographis) heme. Biochemistry (2004)

Release Date

2004-09-28

Peptides

Cytochrome c-552: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome c-552

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