SMTL ID : 1r20.2 (1 other biounit)

Crystal structure of the ligand-binding domains of the heterodimer EcR/USP bound to the synthetic agonist BYI06830

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-2-2-mer

Ligands

2 x EPH: L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE(Non-covalent)

EPH.1: 19 residues within 4Å: Chain A: L.27, V.35, P.36, F.39, V.43, L.46, C.47, L.87, M.120, L.128, S.132, Q.135, A.136, V.138, I.141, S.228, H.231, F.235, L.237 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.27, A:F.39, A:V.43, A:L.46, A:L.128, A:L.128, A:V.138, A:V.138, A:I.141, A:H.231, A:F.235 Hydrogen bonds: A:Q.135, A:Q.135 EPH.3: 19 residues within 4Å: Chain C: L.27, V.35, P.36, F.39, V.43, L.46, C.47, L.87, M.120, L.128, S.132, Q.135, A.136, V.138, I.141, S.228, H.231, F.235, L.237 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:L.27, C:F.39, C:V.43, C:L.46, C:L.128, C:L.128, C:V.138, C:V.138, C:I.141, C:H.231, C:F.235 Hydrogen bonds: C:Q.135, C:Q.135

2 x HWG: N-(TERT-BUTYL)-3,5-DIMETHYL-N'-[(5-METHYL-2,3-DIHYDRO-1,4-BENZODIOXIN-6-YL)CARBONYL]BENZOHYDRAZIDE(Non-covalent)

HWG.2: 18 residues within 4Å: Chain B: I.72, T.73, T.76, S.110, M.113, V.117, Y.136, Y.141, M.146, V.149, D.152, L.153, L.233, Q.236, N.237, M.240, L.244, W.259 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:I.72, B:M.113, B:V.117, B:V.149, B:L.153, B:M.240, B:L.244, B:W.259, B:W.259 Hydrogen bonds: B:Y.141 HWG.4: 18 residues within 4Å: Chain D: I.72, T.73, T.76, S.110, M.113, V.117, Y.136, Y.141, M.146, V.149, D.152, L.153, L.233, Q.236, N.237, M.240, L.244, W.259 12 PLIP interactions: 12 interactions with chain D Hydrophobic interactions: D:I.72, D:M.113, D:V.117, D:V.149, D:L.153, D:M.240, D:L.244, D:W.259, D:W.259 Hydrogen bonds: D:T.76, D:Y.141, D:Y.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Billas, I.M.L. et al., Structural adaptability in the ligand-binding pocket of the ecdysone hormone receptor. Nature (2003)

Release Date

2003-11-18

Peptides

ULTRASPIRACLE PROTEIN: AC
ECDYSONE RECEPTOR: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
D

D
D

ULTRASPIRACLE PROTEIN

ECDYSONE RECEPTOR

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