SMTL ID : 1r5g.1

Crystal Structure of MetAP2 complexed with A311263

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 6 residues within 4Å: Chain A: F.110, D.142, D.153, E.350 Ligands: MN.2, AO1.3 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.142, A:D.142, A:D.153, A:E.350, H2O.267 MN.2: 7 residues within 4Å: Chain A: D.153, H.222, A.253, E.255, E.350 Ligands: MN.1, AO1.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.153, A:H.222, A:E.255, A:E.350

1 x AO1: (2S,3R)-3-AMINO-2-HYDROXY-5-(ETHYLSULFANYL)PENTANOYL-((S)-(-)-(1-NAPHTHYL)ETHYL)AMIDE(Non-covalent)

AO1.3: 18 residues within 4Å: Chain A: F.110, H.122, D.142, D.153, L.219, N.220, G.221, H.222, I.229, H.230, T.234, E.255, M.275, A.305, Y.335, E.350 Ligands: MN.1, MN.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.219, A:H.222, A:T.234, A:Y.335, A:Y.335 Hydrogen bonds: A:H.122, A:D.153 Water bridges: A:Q.348 pi-Stacking: A:H.230, A:H.230

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sheppard, G.S. et al., 3-Amino-2-hydroxyamides and related compounds as inhibitors of methionine aminopeptidase-2. Bioorg.Med.Chem.Lett. (2004)

Release Date

2004-10-12

Peptides

Methionine aminopeptidase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Methionine aminopeptidase 2

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