SMTL ID : 1rfx.3 (2 other biounits)

Crystal Structure of resisitin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-hexamer

Ligands

22 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: V.92, A.93, S.94 Chain F: D.66, Q.76 Ligands: PEG.36 Ligand excluded by PLIP CL.2: 2 residues within 4Å: Chain A: D.66, I.67 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: S.94 Chain F: H.74, Q.76 Ligands: ACT.39 Ligand excluded by PLIP CL.4: 1 residues within 4Å: Chain A: D.13 Ligand excluded by PLIP CL.5: 1 residues within 4Å: Chain A: R.68 Ligand excluded by PLIP CL.9: 6 residues within 4Å: Chain B: V.92, A.93, S.94 Chain D: D.66, Q.76 Ligands: PEG.24 Ligand excluded by PLIP CL.10: 2 residues within 4Å: Chain B: D.66, I.67 Ligand excluded by PLIP CL.11: 4 residues within 4Å: Chain B: S.94 Chain D: H.74, Q.76 Ligands: ACT.27 Ligand excluded by PLIP CL.12: 1 residues within 4Å: Chain B: D.13 Ligand excluded by PLIP CL.13: 1 residues within 4Å: Chain B: R.68 Ligand excluded by PLIP CL.17: 3 residues within 4Å: Chain C: I.67, E.69, E.70 Ligand excluded by PLIP CL.18: 1 residues within 4Å: Chain C: N.30 Ligand excluded by PLIP CL.19: 4 residues within 4Å: Chain C: F.24, P.25, I.28 Chain D: A.27 Ligand excluded by PLIP CL.20: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.25: 2 residues within 4Å: Chain D: L.44, R.68 Ligand excluded by PLIP CL.26: 2 residues within 4Å: Chain D: P.48, E.49 Ligand excluded by PLIP CL.29: 3 residues within 4Å: Chain E: I.67, E.69, E.70 Ligand excluded by PLIP CL.30: 1 residues within 4Å: Chain E: N.30 Ligand excluded by PLIP CL.31: 4 residues within 4Å: Chain E: F.24, P.25, I.28 Chain F: A.27 Ligand excluded by PLIP CL.32: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.37: 2 residues within 4Å: Chain F: L.44, R.68 Ligand excluded by PLIP CL.38: 2 residues within 4Å: Chain F: P.48, E.49 Ligand excluded by PLIP

14 x ACT: ACETATE ION(Non-functional Binders)

ACT.6: 4 residues within 4Å: Chain A: D.66, R.68, H.74, Q.76 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.68, A:R.68 Salt bridges: A:R.68, A:H.74 ACT.7: 5 residues within 4Å: Chain A: T.37, R.86 Chain E: N.34, K.89, Q.91 9 PLIP interactions: 4 interactions with chain E, 5 interactions with chain A Hydrophobic interactions: E:K.89, A:T.37 Hydrogen bonds: E:N.34, E:Q.91, A:T.37, A:T.37, A:R.86 Salt bridges: E:K.89 Water bridges: A:T.37 ACT.8: 2 residues within 4Å: Chain A: A.11, K.14 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:K.14 ACT.14: 4 residues within 4Å: Chain B: D.66, R.68, H.74, Q.76 4 PLIP interactions: 4 interactions with chain B Water bridges: B:R.68, B:R.68 Salt bridges: B:R.68, B:H.74 ACT.15: 5 residues within 4Å: Chain B: T.37, R.86 Chain C: N.34, K.89, Q.91 8 PLIP interactions: 4 interactions with chain C, 4 interactions with chain B Hydrophobic interactions: C:K.89, B:T.37 Hydrogen bonds: C:N.34, C:Q.91, B:T.37, B:R.86 Salt bridges: C:K.89 Water bridges: B:T.37 ACT.16: 2 residues within 4Å: Chain B: A.11, K.14 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:K.14 ACT.21: 7 residues within 4Å: Chain C: G.32, L.33 Chain D: G.50, T.51, A.52, C.88, K.89 No protein-ligand interaction detected (PLIP) ACT.22: 3 residues within 4Å: Chain C: G.63, S.64, W.65 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:W.65 ACT.27: 4 residues within 4Å: Chain D: K.43, R.68, H.74 Ligands: CL.11 7 PLIP interactions: 7 interactions with chain D Hydrophobic interactions: D:K.43 Water bridges: D:R.68, D:R.68, D:R.68 Salt bridges: D:K.43, D:R.68, D:H.74 ACT.28: 1 residues within 4Å: Chain D: E.69 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:E.69 ACT.33: 7 residues within 4Å: Chain E: G.32, L.33 Chain F: G.50, T.51, A.52, C.88, K.89 No protein-ligand interaction detected (PLIP) ACT.34: 3 residues within 4Å: Chain E: G.63, S.64, W.65 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:W.65 ACT.39: 4 residues within 4Å: Chain F: K.43, R.68, H.74 Ligands: CL.3 7 PLIP interactions: 7 interactions with chain F Hydrophobic interactions: F:K.43 Water bridges: F:R.68, F:R.68, F:R.68 Salt bridges: F:K.43, F:R.68, F:H.74 ACT.40: 1 residues within 4Å: Chain F: E.69 1 PLIP interactions: 1 interactions with chain F Hydrophobic interactions: F:E.69

2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.23: 9 residues within 4Å: Chain B: W.36, P.48, E.49, K.89 Chain C: V.38, S.39, S.40, R.41, S.46 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:R.41 Water bridges: C:S.40, C:R.41, C:S.46 PGE.35: 9 residues within 4Å: Chain A: W.36, P.48, E.49, K.89 Chain E: V.38, S.39, S.40, R.41, S.46 4 PLIP interactions: 4 interactions with chain E Hydrogen bonds: E:R.41 Water bridges: E:S.40, E:R.41, E:S.46

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.24: 8 residues within 4Å: Chain B: Q.91, V.92 Chain C: S.39, W.82, A.84 Chain D: W.65, D.66 Ligands: CL.9 5 PLIP interactions: 1 interactions with chain C, 3 interactions with chain B, 1 interactions with chain D Hydrogen bonds: C:S.39, B:V.92 Water bridges: B:Q.91, B:Q.91, D:I.67 PEG.36: 8 residues within 4Å: Chain A: Q.91, V.92 Chain E: S.39, W.82, A.84 Chain F: W.65, D.66 Ligands: CL.1 5 PLIP interactions: 2 interactions with chain E, 2 interactions with chain A, 1 interactions with chain F Hydrogen bonds: E:S.39, A:V.92 Water bridges: E:T.37, A:Q.91, F:I.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patel, S.D. et al., Disulfide-dependent multimeric assembly of resistin family hormones. Science (2004)

Release Date

2004-06-08

Peptides

Resistin: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
B

D
C

E
B

F
C

Resistin

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