SMTL ID : 1rjx.3 (2 other biounits)

Human PLASMINOGEN CATALYTIC DOMAIN, K698M MUTANT

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-hexamer

Ligands

48 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.245, N.246 Ligand excluded by PLIP SO4.2: 4 residues within 4Å: Chain A: R.100, Q.177, S.178, T.179 Ligand excluded by PLIP SO4.3: 3 residues within 4Å: Chain A: S.92, R.93, K.107 Ligand excluded by PLIP SO4.4: 2 residues within 4Å: Chain A: R.100, R.235 Ligand excluded by PLIP SO4.5: 5 residues within 4Å: Chain A: H.27, E.83, K.117 Chain B: R.175 Ligands: SO4.7 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain A: R.168, Y.169, E.170 Ligand excluded by PLIP SO4.7: 4 residues within 4Å: Chain A: P.26, H.27 Chain B: R.175 Ligands: SO4.5 Ligand excluded by PLIP SO4.8: 7 residues within 4Å: Chain A: H.185, L.186, A.187 Chain F: R.133, P.159, H.185 Ligands: SO4.48 Ligand excluded by PLIP SO4.9: 2 residues within 4Å: Chain B: R.245, N.246 Ligand excluded by PLIP SO4.10: 4 residues within 4Å: Chain B: R.100, Q.177, S.178, T.179 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain B: S.92, R.93, K.107 Ligand excluded by PLIP SO4.12: 2 residues within 4Å: Chain B: R.100, R.235 Ligand excluded by PLIP SO4.13: 5 residues within 4Å: Chain B: H.27, E.83, K.117 Chain C: R.175 Ligands: SO4.15 Ligand excluded by PLIP SO4.14: 3 residues within 4Å: Chain B: R.168, Y.169, E.170 Ligand excluded by PLIP SO4.15: 4 residues within 4Å: Chain B: P.26, H.27 Chain C: R.175 Ligands: SO4.13 Ligand excluded by PLIP SO4.16: 7 residues within 4Å: Chain B: H.185, L.186, A.187 Chain E: R.133, P.159, H.185 Ligands: SO4.40 Ligand excluded by PLIP SO4.17: 2 residues within 4Å: Chain C: R.245, N.246 Ligand excluded by PLIP SO4.18: 4 residues within 4Å: Chain C: R.100, Q.177, S.178, T.179 Ligand excluded by PLIP SO4.19: 3 residues within 4Å: Chain C: S.92, R.93, K.107 Ligand excluded by PLIP SO4.20: 2 residues within 4Å: Chain C: R.100, R.235 Ligand excluded by PLIP SO4.21: 5 residues within 4Å: Chain A: R.175 Chain C: H.27, E.83, K.117 Ligands: SO4.23 Ligand excluded by PLIP SO4.22: 3 residues within 4Å: Chain C: R.168, Y.169, E.170 Ligand excluded by PLIP SO4.23: 4 residues within 4Å: Chain A: R.175 Chain C: P.26, H.27 Ligands: SO4.21 Ligand excluded by PLIP SO4.24: 7 residues within 4Å: Chain C: H.185, L.186, A.187 Chain D: R.133, P.159, H.185 Ligands: SO4.32 Ligand excluded by PLIP SO4.25: 2 residues within 4Å: Chain D: R.245, N.246 Ligand excluded by PLIP SO4.26: 4 residues within 4Å: Chain D: R.100, Q.177, S.178, T.179 Ligand excluded by PLIP SO4.27: 3 residues within 4Å: Chain D: S.92, R.93, K.107 Ligand excluded by PLIP SO4.28: 2 residues within 4Å: Chain D: R.100, R.235 Ligand excluded by PLIP SO4.29: 5 residues within 4Å: Chain D: H.27, E.83, K.117 Chain E: R.175 Ligands: SO4.31 Ligand excluded by PLIP SO4.30: 3 residues within 4Å: Chain D: R.168, Y.169, E.170 Ligand excluded by PLIP SO4.31: 4 residues within 4Å: Chain D: P.26, H.27 Chain E: R.175 Ligands: SO4.29 Ligand excluded by PLIP SO4.32: 7 residues within 4Å: Chain C: R.133, P.159, H.185 Chain D: H.185, L.186, A.187 Ligands: SO4.24 Ligand excluded by PLIP SO4.33: 2 residues within 4Å: Chain E: R.245, N.246 Ligand excluded by PLIP SO4.34: 4 residues within 4Å: Chain E: R.100, Q.177, S.178, T.179 Ligand excluded by PLIP SO4.35: 3 residues within 4Å: Chain E: S.92, R.93, K.107 Ligand excluded by PLIP SO4.36: 2 residues within 4Å: Chain E: R.100, R.235 Ligand excluded by PLIP SO4.37: 5 residues within 4Å: Chain E: H.27, E.83, K.117 Chain F: R.175 Ligands: SO4.39 Ligand excluded by PLIP SO4.38: 3 residues within 4Å: Chain E: R.168, Y.169, E.170 Ligand excluded by PLIP SO4.39: 4 residues within 4Å: Chain E: P.26, H.27 Chain F: R.175 Ligands: SO4.37 Ligand excluded by PLIP SO4.40: 7 residues within 4Å: Chain B: R.133, P.159, H.185 Chain E: H.185, L.186, A.187 Ligands: SO4.16 Ligand excluded by PLIP SO4.41: 2 residues within 4Å: Chain F: R.245, N.246 Ligand excluded by PLIP SO4.42: 4 residues within 4Å: Chain F: R.100, Q.177, S.178, T.179 Ligand excluded by PLIP SO4.43: 3 residues within 4Å: Chain F: S.92, R.93, K.107 Ligand excluded by PLIP SO4.44: 2 residues within 4Å: Chain F: R.100, R.235 Ligand excluded by PLIP SO4.45: 5 residues within 4Å: Chain D: R.175 Chain F: H.27, E.83, K.117 Ligands: SO4.47 Ligand excluded by PLIP SO4.46: 3 residues within 4Å: Chain F: R.168, Y.169, E.170 Ligand excluded by PLIP SO4.47: 4 residues within 4Å: Chain D: R.175 Chain F: P.26, H.27 Ligands: SO4.45 Ligand excluded by PLIP SO4.48: 7 residues within 4Å: Chain A: R.133, P.159, H.185 Chain F: H.185, L.186, A.187 Ligands: SO4.8 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Terzyan, S. et al., Characterization of Lys-698 to met substitution in human plasminogen catalytic domain. Proteins (2004)

Release Date

2003-12-02

Peptides

Plasminogen: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

D
B

E
B

F
B

Plasminogen

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