SMTL ID : 1s9q.2 (1 other biounit)

crystal structure of the ligand-binding domain of the estrogen-related receptor gamma in complex with 4-hydroxytamoxifen

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-tetramer

Ligands

4 x OHT: 4-HYDROXYTAMOXIFEN(Non-covalent)

OHT.1: 19 residues within 4Å: Chain A: L.61, C.62, L.64, A.65, D.66, E.68, L.69, W.98, M.99, L.102, R.109, Y.119, L.135, L.138, A.224, H.227, F.228, I.231 Ligands: CHD.2 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:L.61, A:L.64, A:A.65, A:W.98, A:L.102, A:L.102, A:Y.119, A:L.135, A:L.138, A:F.228, A:F.228, A:I.231 Hydrogen bonds: A:E.68, A:R.109 Water bridges: A:R.109 Salt bridges: A:D.66 pi-Stacking: A:Y.119 OHT.3: 18 residues within 4Å: Chain B: L.61, C.62, A.65, D.66, E.68, W.98, M.99, L.102, V.106, R.109, Y.119, L.135, L.138, I.142, A.224, H.227, F.228 Ligands: CHD.4 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:L.61, B:A.65, B:A.65, B:L.102, B:L.102, B:V.106, B:Y.119, B:L.135, B:L.138, B:I.142, B:F.228, B:F.228 Hydrogen bonds: B:E.68, B:R.109 Water bridges: B:R.109 Salt bridges: B:D.66 pi-Stacking: B:Y.119 OHT.5: 19 residues within 4Å: Chain C: L.61, C.62, L.64, A.65, D.66, E.68, L.69, W.98, M.99, L.102, R.109, Y.119, L.135, L.138, A.224, H.227, F.228, I.231 Ligands: CHD.6 17 PLIP interactions: 17 interactions with chain C Hydrophobic interactions: C:L.61, C:L.64, C:A.65, C:W.98, C:L.102, C:L.102, C:Y.119, C:L.135, C:L.138, C:F.228, C:F.228, C:I.231 Hydrogen bonds: C:E.68, C:R.109 Water bridges: C:R.109 Salt bridges: C:D.66 pi-Stacking: C:Y.119 OHT.7: 18 residues within 4Å: Chain D: L.61, C.62, A.65, D.66, E.68, W.98, M.99, L.102, V.106, R.109, Y.119, L.135, L.138, I.142, A.224, H.227, F.228 Ligands: CHD.8 17 PLIP interactions: 17 interactions with chain D Hydrophobic interactions: D:L.61, D:A.65, D:A.65, D:L.102, D:L.102, D:V.106, D:Y.119, D:L.135, D:L.138, D:I.142, D:F.228, D:F.228 Hydrogen bonds: D:E.68, D:R.109 Water bridges: D:R.109 Salt bridges: D:D.66 pi-Stacking: D:Y.119

4 x CHD: CHOLIC ACID(Non-covalent)

CHD.2: 9 residues within 4Å: Chain A: D.66, L.69, V.70, I.73, W.98, Y.229 Chain C: H.240, F.243 Ligands: OHT.1 9 PLIP interactions: 8 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:L.69, A:V.70, A:I.73, A:W.98, A:W.98, C:F.243 Hydrogen bonds: A:D.66, A:Y.229, A:Y.229 CHD.4: 10 residues within 4Å: Chain B: D.66, L.69, V.70, I.73, W.98 Chain D: P.238, M.239, L.242, F.243 Ligands: OHT.3 8 PLIP interactions: 5 interactions with chain B, 3 interactions with chain D Hydrophobic interactions: B:L.69, B:V.70, B:I.73, B:W.98, B:W.98, D:L.242, D:F.243 Hydrogen bonds: D:P.238 CHD.6: 9 residues within 4Å: Chain A: H.240, F.243 Chain C: D.66, L.69, V.70, I.73, W.98, Y.229 Ligands: OHT.5 9 PLIP interactions: 7 interactions with chain C, 2 interactions with chain A Hydrophobic interactions: C:L.69, C:V.70, C:I.73, C:W.98, C:W.98, A:F.243 Hydrogen bonds: C:D.66, C:Y.229, A:H.240 CHD.8: 10 residues within 4Å: Chain B: P.238, M.239, L.242, F.243 Chain D: D.66, L.69, V.70, I.73, W.98 Ligands: OHT.7 8 PLIP interactions: 5 interactions with chain D, 3 interactions with chain B Hydrophobic interactions: D:L.69, D:V.70, D:I.73, D:W.98, D:W.98, B:L.242, B:F.243 Hydrogen bonds: B:P.238

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Greschik, H. et al., Structural Basis for the Deactivation of the Estrogen-related Receptor {gamma} by Diethylstilbestrol or 4-Hydroxytamoxifen and Determinants of Selectivity. J.Biol.Chem. (2004)

Release Date

2004-06-08

Peptides

Estrogen-related receptor gamma: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Estrogen-related receptor gamma

Related Entries With Identical Sequence