SMTL ID : 1u2z.2 (2 other biounits)

Crystal structure of histone K79 methyltransferase Dot1p from yeast

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 18 residues within 4Å: Chain A: N.220, Y.221, G.224, E.225, L.226, D.248, G.250, S.251, C.256, C.272, E.273, I.274, M.275, K.309, S.310, F.311, N.330, L.338 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:N.330 Hydrogen bonds: A:L.226, A:D.248, A:S.251, A:I.274, A:S.310, A:F.311 Water bridges: A:Y.221, A:Y.223, A:N.255 pi-Stacking: A:F.311

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sawada, K. et al., Structure of the conserved core of the yeast Dot1p, a nucleosomal histone H3 lysine 79 methyltransferase. J.Biol.Chem. (2004)

Release Date

2004-09-07

Peptides

Histone-lysine N-methyltransferase, H3 lysine-79 specific: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Histone-lysine N-methyltransferase, H3 lysine-79 specific

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