SMTL ID : 1u8y.1 (1 other biounit)

CRystal structures of Ral-GppNHp and Ral-GDP reveal two novel binding sites that are also present in Ras and Rap

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.1: 2 residues within 4Å: Chain A: S.18 Ligands: GNP.3 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.18, H2O.1, H2O.1, H2O.1 MG.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)

GNP.3: 23 residues within 4Å: Chain A: S.12, G.13, G.14, V.15, G.16, K.17, S.18, A.19, F.29, V.30, E.31, D.32, Y.33, A.60, G.61, N.117, K.118, D.120, L.121, S.147, A.148, K.149 Ligands: MG.1 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:G.14, A:V.15, A:G.16, A:K.17, A:K.17, A:S.18, A:A.19, A:V.30, A:D.32, A:D.32, A:G.61, A:N.117, A:K.118, A:K.118, A:S.147, A:A.148, A:K.149 Water bridges: A:S.18, A:S.18, A:E.31, A:Y.33 Salt bridges: A:D.120 pi-Stacking: A:F.29, A:F.29

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nicely, N.I. et al., Crystal Structures of Ral-GppNHp and Ral-GDP Reveal Two Binding Sites that Are Also Present in Ras and Rap. Structure (2004)

Release Date

2004-11-23

Peptides

Ras-related protein Ral-A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ras-related protein Ral-A

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