SMTL ID : 1umj.3 (2 other biounits)

Crystal structure of Pyrococcus horikoshii CutA in the presence of 3M guanidine hydrochloride

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-trimer

Ligands

6 x GAI: GUANIDINE(Non-covalent)

GAI.1: 8 residues within 4Å: Chain A: D.86 Chain B: D.86 Chain C: D.86 Ligands: GAI.2, GAI.3, GAI.4, GAI.5, GAI.6 6 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A, 2 interactions with chain C Hydrogen bonds: B:D.84, A:D.84, C:D.84 Salt bridges: B:D.86, A:D.86, C:D.86 GAI.2: 11 residues within 4Å: Chain A: D.84, D.86 Chain B: D.84, D.86 Chain C: D.84, D.86 Ligands: GAI.1, GAI.3, GAI.4, GAI.5, GAI.6 8 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A, 3 interactions with chain C Hydrogen bonds: B:D.84, B:D.84, A:D.84, C:D.84, C:D.84 Salt bridges: B:D.86, A:D.86, C:D.86 GAI.3: 8 residues within 4Å: Chain A: D.86 Chain B: D.86 Chain C: D.86 Ligands: GAI.1, GAI.2, GAI.4, GAI.5, GAI.6 6 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A, 2 interactions with chain C Hydrogen bonds: B:D.84, A:D.84, C:D.84 Salt bridges: B:D.86, A:D.86, C:D.86 GAI.4: 11 residues within 4Å: Chain A: D.84, D.86 Chain B: D.84, D.86 Chain C: D.84, D.86 Ligands: GAI.1, GAI.2, GAI.3, GAI.5, GAI.6 8 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A, 3 interactions with chain C Hydrogen bonds: B:D.84, A:D.84, A:D.84, C:D.84, C:D.84 Salt bridges: B:D.86, A:D.86, C:D.86 GAI.5: 8 residues within 4Å: Chain A: D.86 Chain B: D.86 Chain C: D.86 Ligands: GAI.1, GAI.2, GAI.3, GAI.4, GAI.6 6 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A, 2 interactions with chain C Hydrogen bonds: B:D.84, A:D.84, C:D.84 Salt bridges: B:D.86, A:D.86, C:D.86 GAI.6: 11 residues within 4Å: Chain A: D.84, D.86 Chain B: D.84, D.86 Chain C: D.84, D.86 Ligands: GAI.1, GAI.2, GAI.3, GAI.4, GAI.5 8 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A, 2 interactions with chain C Hydrogen bonds: B:D.84, B:D.84, A:D.84, A:D.84, C:D.84 Salt bridges: B:D.86, A:D.86, C:D.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tanaka, Y. et al., Structural evidence for guanidine-protein side chain interactions: crystal structure of CutA from Pyrococcus horikoshii in 3M guanidine hydrochloride. Biochem.Biophys.Res.Commun. (2004)

Release Date

2004-10-05

Peptides

periplasmic divalent cation tolerance protein CutA: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

periplasmic divalent cation tolerance protein CutA

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