SMTL ID : 1uog.1

Deacetoxycephalosporin C synthase complexed with deacetoxycephalosporin C

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-trimer

Ligands

3 x P1C: DEACETOXYCEPHALOSPORIN-C(Non-covalent)

P1C.1: 18 residues within 4Å: Chain A: R.160, R.162, H.183, D.185, T.190, I.192, L.204, F.225, H.243, V.245, V.262, F.264, V.303, N.304, I.305 Chain B: S.309, K.310 Ligands: FE2.2 15 PLIP interactions: 14 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:I.192, A:F.225, A:V.262, A:N.304, A:I.305 Hydrogen bonds: A:R.160, A:R.162, A:N.304, A:N.304, A:I.305, A:I.305, B:K.310 Water bridges: A:R.160, A:R.160, A:N.301 P1C.3: 18 residues within 4Å: Chain B: R.160, R.162, H.183, D.185, T.190, I.192, L.204, F.225, H.243, V.245, V.262, F.264, V.303, N.304, I.305 Chain C: S.309, K.310 Ligands: FE2.4 15 PLIP interactions: 14 interactions with chain B, 1 interactions with chain C Hydrophobic interactions: B:I.192, B:F.225, B:V.262, B:N.304, B:I.305 Hydrogen bonds: B:R.160, B:R.162, B:N.304, B:N.304, B:I.305, B:I.305, C:K.310 Water bridges: B:R.160, B:R.160, B:N.301 P1C.5: 18 residues within 4Å: Chain A: S.309, K.310 Chain C: R.160, R.162, H.183, D.185, T.190, I.192, L.204, F.225, H.243, V.245, V.262, F.264, V.303, N.304, I.305 Ligands: FE2.6 15 PLIP interactions: 14 interactions with chain C, 1 interactions with chain A Hydrophobic interactions: C:I.192, C:F.225, C:V.262, C:N.304, C:I.305 Hydrogen bonds: C:R.160, C:R.162, C:N.304, C:N.304, C:I.305, C:I.305, A:K.310 Water bridges: C:R.160, C:R.160, C:N.301

3 x FE2: FE (II) ION(Non-covalent)

FE2.2: 4 residues within 4Å: Chain A: H.183, D.185, H.243 Ligands: P1C.1 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.183, A:D.185, A:H.243 FE2.4: 4 residues within 4Å: Chain B: H.183, D.185, H.243 Ligands: P1C.3 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.183, B:D.185, B:H.243 FE2.6: 4 residues within 4Å: Chain C: H.183, D.185, H.243 Ligands: P1C.5 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:H.183, C:D.185, C:H.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Valegard, K. et al., The Structural Basis of Cephalosporin Formation in a Mononuclear Ferrous Enzyme. Nat.Struct.Mol.Biol. (2004)

Release Date

2004-01-09

Peptides

DEACETOXYCEPHALOSPORIN C SYNTHETASE: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

DEACETOXYCEPHALOSPORIN C SYNTHETASE

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