SMTL ID : 1uxx.1

CBM6ct from Clostridium thermocellum in complex with xylopentaose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x XYP- XYP- XYP- XYP- XYP: beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose(Non-covalent)

XYP-XYP-XYP-XYP-XYP.1: 13 residues within 4Å: Chain A: I.23, G.24, T.25, S.26, G.33, Y.34, A.63, D.64, T.65, W.92, N.93, P.118, N.120 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.24, A:N.93 Water bridges: A:T.25

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain A: E.8, E.10, S.30, D.122 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.8, A:E.10, A:S.30, A:D.122, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pires, V.M.R. et al., The Crystal Structure of the Family 6 Carbohydrate Binding Module from Cellvibrio Mixtus Endoglucanase 5A in Complex with Oligosaccharides Reveals Two Distinct Binding Sites with Different Ligand Specificities. J.Biol.Chem. (2004)

Release Date

2004-03-11

Peptides

XYLANASE U: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

XYLANASE U

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