SMTL ID : 1vbu.1 (1 other biounit)

Crystal structure of native xylanase 10B from Thermotoga maritima

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.62 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.62

4 x ACY: ACETIC ACID(Non-functional Binders)

ACY.2: 1 residues within 4Å: Chain A: G.95 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.95 Water bridges: A:W.96 ACY.3: 2 residues within 4Å: Chain A: P.58, N.64 No protein-ligand interaction detected (PLIP) ACY.4: 2 residues within 4Å: Chain A: N.183, A.184 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.184 Water bridges: A:K.185 ACY.5: 5 residues within 4Å: Chain A: Y.177, H.211, W.289, F.293, F.294 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.177, A:F.294 Water bridges: A:H.211, A:H.211 Salt bridges: A:H.211

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 8 residues within 4Å: Chain A: K.52, H.85, W.89, E.134, H.211, E.240, W.281, W.289 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.52, A:H.85, A:W.281 Water bridges: A:N.133, A:E.134, A:E.134, A:H.211

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ihsanawati et al., Structural basis of the substrate subsite and the highly thermal stability of xylanase 10B from Thermotoga maritima MSB8. Proteins (2005)

Release Date

2005-06-28

Peptides

endo-1,4-beta-xylanase B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

endo-1,4-beta-xylanase B

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