SMTL ID : 1vd3.1

Ribonuclease NT in complex with 2'-UMP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x U2P: PHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER(Non-covalent)

U2P.1: 9 residues within 4Å: Chain A: Y.12, H.43, W.46, N.48, W.54, H.96, E.97, K.100, H.101 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:N.48, A:W.54 Water bridges: A:H.96, A:E.97, A:K.100, A:K.100, A:H.101 Salt bridges: A:H.43, A:H.96, A:K.100, A:H.101 pi-Stacking: A:W.46, A:W.54

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kawano, S. et al., Crystal Structure of the Nicotiana glutinosa Ribonuclease NT in Complex with Nucleotide Monophosphates. to be published

Release Date

2005-04-26

Peptides

RNase NGR3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNase NGR3

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