SMTL ID : 1vlv.1

Crystal structure of Ornithine carbamoyltransferase (TM1097) from Thermotoga maritima at 2.25 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-12-mer

Ligands

36 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: S.69, R.71, T.72, R.120, H.147, L.285, R.312 Ligand excluded by PLIP PO4.2: 11 residues within 4Å: Chain A: G.85, H.86, P.87 Chain I: G.85, H.86, P.87 Chain K: G.85, H.86, P.87 Ligands: PO4.26, PO4.32 Ligand excluded by PLIP PO4.3: 11 residues within 4Å: Chain A: R.68, S.91, N.93 Chain I: R.68, S.91, N.93 Chain K: R.68, S.91, N.93 Ligands: PO4.27, PO4.33 Ligand excluded by PLIP PO4.4: 7 residues within 4Å: Chain B: S.69, R.71, T.72, R.120, H.147, L.285, R.312 Ligand excluded by PLIP PO4.5: 11 residues within 4Å: Chain B: G.85, H.86, P.87 Chain F: G.85, H.86, P.87 Chain J: G.85, H.86, P.87 Ligands: PO4.17, PO4.29 Ligand excluded by PLIP PO4.6: 11 residues within 4Å: Chain B: R.68, S.91, N.93 Chain F: R.68, S.91, N.93 Chain J: R.68, S.91, N.93 Ligands: PO4.18, PO4.30 Ligand excluded by PLIP PO4.7: 7 residues within 4Å: Chain C: S.69, R.71, T.72, R.120, H.147, L.285, R.312 Ligand excluded by PLIP PO4.8: 11 residues within 4Å: Chain C: G.85, H.86, P.87 Chain E: G.85, H.86, P.87 Chain G: G.85, H.86, P.87 Ligands: PO4.14, PO4.20 Ligand excluded by PLIP PO4.9: 11 residues within 4Å: Chain C: R.68, S.91, N.93 Chain E: R.68, S.91, N.93 Chain G: R.68, S.91, N.93 Ligands: PO4.15, PO4.21 Ligand excluded by PLIP PO4.10: 7 residues within 4Å: Chain D: S.69, R.71, T.72, R.120, H.147, L.285, R.312 Ligand excluded by PLIP PO4.11: 11 residues within 4Å: Chain D: G.85, H.86, P.87 Chain H: G.85, H.86, P.87 Chain L: G.85, H.86, P.87 Ligands: PO4.23, PO4.35 Ligand excluded by PLIP PO4.12: 11 residues within 4Å: Chain D: R.68, S.91, N.93 Chain H: R.68, S.91, N.93 Chain L: R.68, S.91, N.93 Ligands: PO4.24, PO4.36 Ligand excluded by PLIP PO4.13: 7 residues within 4Å: Chain E: S.69, R.71, T.72, R.120, H.147, L.285, R.312 Ligand excluded by PLIP PO4.14: 11 residues within 4Å: Chain C: G.85, H.86, P.87 Chain E: G.85, H.86, P.87 Chain G: G.85, H.86, P.87 Ligands: PO4.8, PO4.20 Ligand excluded by PLIP PO4.15: 11 residues within 4Å: Chain C: R.68, S.91, N.93 Chain E: R.68, S.91, N.93 Chain G: R.68, S.91, N.93 Ligands: PO4.9, PO4.21 Ligand excluded by PLIP PO4.16: 7 residues within 4Å: Chain F: S.69, R.71, T.72, R.120, H.147, L.285, R.312 Ligand excluded by PLIP PO4.17: 11 residues within 4Å: Chain B: G.85, H.86, P.87 Chain F: G.85, H.86, P.87 Chain J: G.85, H.86, P.87 Ligands: PO4.5, PO4.29 Ligand excluded by PLIP PO4.18: 11 residues within 4Å: Chain B: R.68, S.91, N.93 Chain F: R.68, S.91, N.93 Chain J: R.68, S.91, N.93 Ligands: PO4.6, PO4.30 Ligand excluded by PLIP PO4.19: 7 residues within 4Å: Chain G: S.69, R.71, T.72, R.120, H.147, L.285, R.312 Ligand excluded by PLIP PO4.20: 11 residues within 4Å: Chain C: G.85, H.86, P.87 Chain E: G.85, H.86, P.87 Chain G: G.85, H.86, P.87 Ligands: PO4.8, PO4.14 Ligand excluded by PLIP PO4.21: 11 residues within 4Å: Chain C: R.68, S.91, N.93 Chain E: R.68, S.91, N.93 Chain G: R.68, S.91, N.93 Ligands: PO4.9, PO4.15 Ligand excluded by PLIP PO4.22: 7 residues within 4Å: Chain H: S.69, R.71, T.72, R.120, H.147, L.285, R.312 Ligand excluded by PLIP PO4.23: 11 residues within 4Å: Chain D: G.85, H.86, P.87 Chain H: G.85, H.86, P.87 Chain L: G.85, H.86, P.87 Ligands: PO4.11, PO4.35 Ligand excluded by PLIP PO4.24: 11 residues within 4Å: Chain D: R.68, S.91, N.93 Chain H: R.68, S.91, N.93 Chain L: R.68, S.91, N.93 Ligands: PO4.12, PO4.36 Ligand excluded by PLIP PO4.25: 7 residues within 4Å: Chain I: S.69, R.71, T.72, R.120, H.147, L.285, R.312 Ligand excluded by PLIP PO4.26: 11 residues within 4Å: Chain A: G.85, H.86, P.87 Chain I: G.85, H.86, P.87 Chain K: G.85, H.86, P.87 Ligands: PO4.2, PO4.32 Ligand excluded by PLIP PO4.27: 11 residues within 4Å: Chain A: R.68, S.91, N.93 Chain I: R.68, S.91, N.93 Chain K: R.68, S.91, N.93 Ligands: PO4.3, PO4.33 Ligand excluded by PLIP PO4.28: 7 residues within 4Å: Chain J: S.69, R.71, T.72, R.120, H.147, L.285, R.312 Ligand excluded by PLIP PO4.29: 11 residues within 4Å: Chain B: G.85, H.86, P.87 Chain F: G.85, H.86, P.87 Chain J: G.85, H.86, P.87 Ligands: PO4.5, PO4.17 Ligand excluded by PLIP PO4.30: 11 residues within 4Å: Chain B: R.68, S.91, N.93 Chain F: R.68, S.91, N.93 Chain J: R.68, S.91, N.93 Ligands: PO4.6, PO4.18 Ligand excluded by PLIP PO4.31: 7 residues within 4Å: Chain K: S.69, R.71, T.72, R.120, H.147, L.285, R.312 Ligand excluded by PLIP PO4.32: 11 residues within 4Å: Chain A: G.85, H.86, P.87 Chain I: G.85, H.86, P.87 Chain K: G.85, H.86, P.87 Ligands: PO4.2, PO4.26 Ligand excluded by PLIP PO4.33: 11 residues within 4Å: Chain A: R.68, S.91, N.93 Chain I: R.68, S.91, N.93 Chain K: R.68, S.91, N.93 Ligands: PO4.3, PO4.27 Ligand excluded by PLIP PO4.34: 7 residues within 4Å: Chain L: S.69, R.71, T.72, R.120, H.147, L.285, R.312 Ligand excluded by PLIP PO4.35: 11 residues within 4Å: Chain D: G.85, H.86, P.87 Chain H: G.85, H.86, P.87 Chain L: G.85, H.86, P.87 Ligands: PO4.11, PO4.23 Ligand excluded by PLIP PO4.36: 11 residues within 4Å: Chain D: R.68, S.91, N.93 Chain H: R.68, S.91, N.93 Chain L: R.68, S.91, N.93 Ligands: PO4.12, PO4.24 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of Ornithine carbamoyltransferase (TM1097) from Thermotoga maritima at 2.25 A resolution. To be published

Release Date

2004-09-21

Peptides

Ornithine carbamoyltransferase: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

Ornithine carbamoyltransferase