SMTL ID : 1vme.1

Crystal structure of Flavoprotein (TM0755) from Thermotoga maritima at 1.80 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: R.339, F.340, L.343 Chain B: R.339, F.340, L.343 Ligand excluded by PLIP CL.2: 6 residues within 4Å: Chain A: S.274, M.275, Y.276, G.277, F.278, V.279 Ligand excluded by PLIP CL.6: 6 residues within 4Å: Chain B: S.274, M.275, Y.276, G.277, F.278, V.279 Ligand excluded by PLIP

2 x FEO: MU-OXO-DIIRON(Non-covalent)

FEO.3: 7 residues within 4Å: Chain A: H.97, E.99, D.101, H.102, H.163, D.180, H.240 10 PLIP interactions: 8 interactions with chain A, 1 interactions with chain B, 1 Ligand-Water interactions, Metal complexes: A:H.97, A:E.99, A:D.101, A:H.102, A:H.163, A:D.180, A:D.180, A:H.240, H2O.1 Water bridges: B:Y.276 FEO.7: 7 residues within 4Å: Chain B: H.97, E.99, D.101, H.102, H.163, D.180, H.240 9 PLIP interactions: 8 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.97, B:E.99, B:D.101, B:H.102, B:H.163, B:D.180, B:D.180, B:H.240, H2O.10

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) EDO.5: 4 residues within 4Å: Chain A: K.389, G.390 Chain B: G.131, F.132 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.390 EDO.8: 5 residues within 4Å: Chain A: G.131, F.132 Chain B: V.360, K.389, G.390 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.390

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of Flavoprotein (TM0755) from Thermotoga maritima at 1.80 A resolution. To be published

Release Date

2004-09-28

Peptides

Flavoprotein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Flavoprotein